RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 MTRQ99707 1265 aa10.79□□□□□ -0.68
HNRNPC-220ENST00000555585 HSD17B14Q9BPX1 270 aa10.79□□□□□ -0.68
HNRNPC-220ENST00000555585 JPH1Q9HDC5 661 aaPredicted RBP10.79□□□□□ -0.68
HNRNPC-220ENST00000555585 RMND1Q9NWS8 449 aa10.79□□□□□ -0.68
HNRNPC-220ENST00000555585 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
HNRNPC-220ENST00000555585 DIS3Q9Y2L1 958 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-220ENST00000555585 MGAMO43451 1857 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 FSD2A1L4K1 749 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 CCNE2O96020 404 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 KRT18P05783 430 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 PSAPP07602 524 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 TGFB3P10600 412 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 PSMC6P62333 389 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 ASIC1P78348 528 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 SP2Q02086 613 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 NEDD9Q14511 834 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 LY6KQ17RY6 165 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 MORN1Q5T089 497 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 L1TD1Q5T7N2 865 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 NT5DC1Q5TFE4 455 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 C11orf57Q6ZUT1 292 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 DYMQ7RTS9 669 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 GPBP1Q86WP2 473 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 SMAP1Q8IYB5 467 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 KCTD17Q8N5Z5 321 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 TRIML1Q8N9V2 468 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 RDM1Q8NG50 284 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 NPLOC4Q8TAT6 608 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 PIGOQ8TEQ8 1089 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 MAML3Q96JK9 1138 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 GSDMAQ96QA5 445 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 NACC1Q96RE7 527 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 C7orf25Q9BPX7 421 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 SENP7Q9BQF6 1050 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 LXNQ9BS40 222 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 NAT10Q9H0A0 1025 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 BCAS3Q9H6U6 928 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 ZSWIM4Q9H7M6 989 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 MLXIPQ9HAP2 919 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 GRPEL1Q9HAV7 217 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 LOXHD1Q8IVV2 1947 aa10.78□□□□□ -0.68
HNRNPC-220ENST00000555585 MYMKA6NI61 221 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 DKC1O60832 514 aaKnown RBP eCLIP10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 EYA4O95677 639 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 GGPS1O95749 300 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 TBC1D8O95759 1140 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 TXNP10599 105 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 CYP2B6P20813 491 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 UBA1P22314 1058 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 RGS2P41220 211 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 QARSP47897 775 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 VEGFBP49765 207 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 ZNF165P49910 485 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 MRE11P49959 708 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 FCGRTP55899 365 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 ACTR2P61160 394 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 HTRA3P83110 453 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 MORC3Q14149 939 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 TTLL4Q14679 1199 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 DPCR1Q3MIW9 517 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 KMT5BQ4FZB7 885 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 MIS18BP1Q6P0N0 1132 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 MAMDC4Q6UXC1 1216 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 DHX37Q8IY37 1157 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 SYT2Q8N9I0 419 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 SPATA20Q8TB22 786 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 FAM200AQ8TCP9 573 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 TINF2Q9BSI4 451 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 TRIM9Q9C026 710 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 VTA1Q9NP79 307 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 PDGFCQ9NRA1 345 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 EXOC1Q9NV70 894 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 DACH1Q9UI36 760 aa10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 DDX41Q9UJV9 622 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-220ENST00000555585 ARHGEF35A5YM69 484 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 BACH1O14867 736 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 KLRC4O43908 158 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 TRPA1O75762 1119 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 ARIH2O95376 493 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 CAVIN2O95810 425 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 SNAI1O95863 264 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 SUPT20HL2P0C7V6 817 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 IDEP14735 1019 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 MAP2K2P36507 400 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 PSMC4P43686 418 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 SLC12A3P55017 1021 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 PSMC5P62195 406 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 KCNB1Q14721 858 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 KIF22Q14807 665 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 UGCGQ16739 394 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 SWSAP1Q6NVH7 229 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 ABHD15Q6UXT9 468 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 SCFD2Q8WU76 684 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 SOCS4Q8WXH5 440 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 DDX12PQ92771 950 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 CCDC43Q96MW1 224 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 BHMT2Q9H2M3 363 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms