RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SPATA31C2B4DYI2 1134 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 MCM3APO60318 1980 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
NEK9-205ENST00000555405 KCNA2P16389 499 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 QARSP47897 775 aaKnown RBP11.37□□□□□ -0.59
NEK9-205ENST00000555405 ZNF445P59923 1031 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 NELFCDQ8IXH7 590 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 TIGD1Q96MW7 591 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 PPP1R16BQ96T49 567 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 SUGCTQ9HAC7 445 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 GRPEL1Q9HAV7 217 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 FLRT1Q9NZU1 646 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 KDM3AQ9Y4C1 1321 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 SLC15A5A6NIM6 579 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 RSPH10B2B2RC85 870 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
NEK9-205ENST00000555405 RSPH10BP0C881 870 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 KRT76Q01546 638 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 ZNF792Q3KQV3 632 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 CCDC144BQ3MJ40 725 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 KMT5BQ4FZB7 885 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 CCDC60Q8IWA6 550 aaPredicted RBP11.36□□□□□ -0.59
NEK9-205ENST00000555405 AFG1LQ8WV93 481 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 ANP32BQ92688 251 aaKnown RBP11.36□□□□□ -0.59
NEK9-205ENST00000555405 CEP170P1Q96L14 293 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 ZSWIM4Q9H7M6 989 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 TCF7P36402 384 aaPredicted RBP11.36□□□□□ -0.59
NEK9-205ENST00000555405 LACTBP83111 547 aaPredicted RBP11.36□□□□□ -0.59
NEK9-205ENST00000555405 TRIM32Q13049 653 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 ACVR2BQ13705 512 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 NEDD9Q14511 834 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 PYM1Q9BRP8 204 aaKnown RBP11.36□□□□□ -0.59
NEK9-205ENST00000555405 CBX8Q9HC52 389 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 TRPC6Q9Y210 931 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 RLFQ13129 1914 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 TRPM7Q96QT4 1865 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 SNAI1O95863 264 aaPredicted RBP11.36□□□□□ -0.59
NEK9-205ENST00000555405 PSAPP07602 524 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 RGS2P41220 211 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 GRB14Q14449 540 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 MIS18BP1Q6P0N0 1132 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 XRRA1Q6P2D8 792 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 RAET1EQ8TD07 263 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 ZBTB10Q96DT7 871 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 NACC1Q96RE7 527 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 TRIM9Q9C026 710 aa11.36□□□□□ -0.59
NEK9-205ENST00000555405 TBCAO75347 108 aaKnown RBP11.35□□□□□ -0.59
NEK9-205ENST00000555405 FAM13AO94988 1023 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 CDK11BP21127 795 aaKnown RBP11.35□□□□□ -0.59
NEK9-205ENST00000555405 FAM102BQ5T8I3 360 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 MYCT1Q8N699 235 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 HSD17B14Q9BPX1 270 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 RUSC1Q9BVN2 902 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 ZNF302Q9NR11 478 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 USP25Q9UHP3 1055 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 DDX41Q9UJV9 622 aaKnown RBP11.35□□□□□ -0.59
NEK9-205ENST00000555405 GINS2Q9Y248 185 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 KIAA0100Q14667 2235 aaKnown RBP11.35□□□□□ -0.59
NEK9-205ENST00000555405 NLRP12P59046 1061 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 BEX3Q00994 111 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 PPP2R5CQ13362 524 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 GPRC5CQ9NQ84 441 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 PANK4Q9NVE7 773 aa11.35□□□□□ -0.59
NEK9-205ENST00000555405 MAFGO15525 162 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 ZNF286BP0CG31 522 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 YWHABP31946 246 aaKnown RBP11.34□□□□□ -0.59
NEK9-205ENST00000555405 STAT5BP51692 787 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
NEK9-205ENST00000555405 CAP1Q01518 475 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 TNFAIP2Q03169 654 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 DPYDQ12882 1025 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 PTPN21Q16825 1174 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 NIPA1Q7RTP0 329 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 KSR1Q8IVT5 923 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 GLIS3Q8NEA6 775 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 OR6J1Q8NGC5 347 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 SEPT1Q8WYJ6 367 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 STK17AQ9UEE5 414 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 CTNND2Q9UQB3 1225 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 GPR25O00155 361 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 JAK3P52333 1124 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 PSMC5P62195 406 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 PRKCEQ02156 737 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 GHRHRQ02643 423 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 TRAPPC12Q8WVT3 735 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 FAM237AA0A1B0GTK4 181 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 CCDC169A6NNP5 214 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 BMP6P22004 513 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 STK4Q13043 487 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 PADI6Q6TGC4 694 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 ATP6V0A1Q93050 837 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 HHIPL1Q96JK4 782 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
NEK9-205ENST00000555405 ABHD16BQ9H3Z7 469 aa11.34□□□□□ -0.59
NEK9-205ENST00000555405 KBTBD4Q9NVX7 518 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms