RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.45
SHMT2-218ENST00000555213 ADALQ6DHV7 355 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 MIER3Q7Z3K6 550 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 UBE2Q1Q7Z7E8 422 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 ENGASEQ8NFI3 743 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 RAB34Q9BZG1 259 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 ERAP1Q9NZ08 941 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 PCDHA10Q9Y5I2 948 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 H3BRB1 525 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 MARCKSP29966 332 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-218ENST00000555213 SLC26A2P50443 739 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-218ENST00000555213 PPP2R5CQ13362 524 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 SNW1Q13573 536 aaKnown RBP12.26□□□□□ -0.45
SHMT2-218ENST00000555213 MFSD10Q14728 455 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 STK38Q15208 465 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 CSPP1Q1MSJ5 1256 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 FAM47CQ5HY64 1035 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 C7orf31Q8N865 590 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 HAS1Q92839 578 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 ATP6V0A1Q93050 837 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 CLIC6Q96NY7 704 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 GOLPH3LQ9H4A5 285 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 TUT1Q9H6E5 874 aaKnown RBP12.26□□□□□ -0.45
SHMT2-218ENST00000555213 BCAS3Q9H6U6 928 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 DISC1Q9NRI5 854 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 FBXO2Q9UK22 296 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-218ENST00000555213 PCDHA12Q9UN75 941 aa12.26□□□□□ -0.45
SHMT2-218ENST00000555213 FAM237AA0A1B0GTK4 181 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 A0A1W2PQ27 194 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 A0A1W2PQ64 194 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 A0A1W2PQD8 194 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 GSTTP1A0A1W2PQM5 241 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 TLR3O15455 904 aaKnown RBP12.25□□□□□ -0.45
SHMT2-218ENST00000555213 LGR5O75473 907 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 PRPHP41219 470 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 TXKP42681 527 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 PSEN2P49810 448 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 STAT5BP51692 787 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 PSMC6P62333 389 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 PTPN11Q06124 597 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-218ENST00000555213 PTGDRQ13258 359 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 ITGA7Q13683 1181 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 SNX17Q15036 470 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 KIAA0753Q2KHM9 967 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 C1orf53Q5VUE5 145 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 NCAPH2Q6IBW4 605 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 NFRKBQ6P4R8 1299 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 SHC4Q6S5L8 630 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 SLC39A5Q6ZMH5 540 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 TRIM50Q86XT4 487 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 ERMNQ8TAM6 284 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 KCNG4Q8TDN1 519 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 GJA10Q969M2 543 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 MTMR9Q96QG7 549 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 C16orf70Q9BSU1 422 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 UNC45AQ9H3U1 944 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 TTC12Q9H892 705 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-218ENST00000555213 ZNF302Q9NR11 478 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 VAV3Q9UKW4 847 aa12.25□□□□□ -0.45
SHMT2-218ENST00000555213 DCDC2CA8MYV0 355 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 ARVCFO00192 962 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 PQBP1O60828 265 aaKnown RBP12.24□□□□□ -0.45
SHMT2-218ENST00000555213 DKC1O60832 514 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHMT2-218ENST00000555213 ATG7O95352 703 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 MBD3O95983 291 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 CMA1P23946 247 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 MARK3P27448 753 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 RTP1P59025 263 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 ATP2C1P98194 919 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-218ENST00000555213 TPRNQ4KMQ1 711 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 HAUS3Q68CZ6 603 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 PDXDC2PQ6P474 469 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 ABHD15Q6UXT9 468 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 DTHD1Q6ZMT9 781 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 PLPPR4Q7Z2D5 763 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 NEK9Q8TD19 979 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 AFAP1L1Q8TED9 768 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 KAT2BQ92831 832 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 FAM167AQ96KS9 214 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 TMEM60Q9H2L4 133 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 ATP11BQ9Y2G3 1177 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 SRPRBQ9Y5M8 271 aaKnown RBP12.24□□□□□ -0.45
SHMT2-218ENST00000555213 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
SHMT2-218ENST00000555213 IGSF9BQ9UPX0 1349 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 IGKV6D-21A0A0A0MT36 114 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 HAS3O00219 553 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 EVI5O60447 810 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 CUTAO60888 179 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 NR1I2O75469 434 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 GNAT1P11488 350 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 ME1P48163 572 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHMT2-218ENST00000555213 LRRC26Q2I0M4 334 aa12.23□□□□□ -0.45
SHMT2-218ENST00000555213 NBPF20Q3BBV1 942 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms