RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 SLC13A1Q9BZW2 595 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 MKRN2Q9H000 416 aaKnown RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 GBP3Q9H0R5 595 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 GSX1Q9H4S2 264 aaPredicted RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 PGAP2Q9UHJ9 254 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 PTPN22Q9Y2R2 807 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 GIT1Q9Y2X7 761 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 TMX2Q9Y320 296 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 NUB1Q9Y5A7 615 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 EYA2O00167 538 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 PCDHGA12O60330 932 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 GFPT2O94808 682 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 NPTXRO95502 500 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 NCAM1P13591 858 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 SCP2P22307 547 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 IL6STP40189 918 aaPredicted RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 TM4SF4P48230 202 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 CCT5P48643 541 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 FXR1P51114 621 aaKnown RBP eCLIP4.56□□□□□ -1.68
KTN1-220ENST00000555172 IL2P60568 153 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 RNF4P78317 190 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 GRM1Q13255 1194 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 G3BP1Q13283 466 aaKnown RBP eCLIP4.56□□□□□ -1.683e-6■■■■□ 22
KTN1-220ENST00000555172 HSP90AA2PQ14568 343 aaPredicted RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 TAF11Q15544 211 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 TRIM61Q5EBN2 209 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 IFIT1BQ5T764 474 aaKnown RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 MZT2BQ6NZ67 158 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 ADAT2Q7Z6V5 191 aaKnown RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 SNX32Q86XE0 403 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 SCUBE1Q8IWY4 988 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 ZBTB34Q8NCN2 500 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 C1orf162Q8NEQ5 155 aaPredicted RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 OSBP2Q969R2 916 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 LIN37Q96GY3 246 aaPredicted RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 CCDC138Q96M89 665 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 AIFM3Q96NN9 605 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 HAUS7Q99871 368 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 TRMT13Q9NUP7 481 aaKnown RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 LMCD1Q9NZU5 365 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 APEX2Q9UBZ4 518 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 RAPGEFL1Q9UHV5 662 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 PCDHGA9Q9Y5G4 932 aaKnown RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 PCDHGA8Q9Y5G5 932 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 PCDHGA7Q9Y5G6 932 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 PCDHGA6Q9Y5G7 932 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 PCDHGA3Q9Y5H0 932 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 PCDHGA2Q9Y5H1 932 aa4.56□□□□□ -1.68
KTN1-220ENST00000555172 MAGED1Q9Y5V3 778 aaPredicted RBP4.56□□□□□ -1.68
KTN1-220ENST00000555172 XPOTO43592 962 aaKnown RBP4.55□□□□□ -1.68
KTN1-220ENST00000555172 TLR5O60602 858 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 SOD2P04179 222 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 EPHX1P07099 455 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 FAM87AP0C7U9 286 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 PABPC1P11940 636 aaKnown RBP4.55□□□□□ -1.68
KTN1-220ENST00000555172 RAP1GAPP47736 663 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 SUMO1P63165 101 aaKnown RBP4.55□□□□□ -1.68
KTN1-220ENST00000555172 FAM133BQ5BKY9 247 aaKnown RBP4.55□□□□□ -1.68
KTN1-220ENST00000555172 TMEM240Q5SV17 173 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 PGM2L1Q6PCE3 622 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 CHST15Q7LFX5 561 aaPredicted RBP4.55□□□□□ -1.68
KTN1-220ENST00000555172 CATIPQ7Z7H3 387 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 PPFIBP1Q86W92 1011 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 LRRC56Q8IYG6 542 aaPredicted RBP4.55□□□□□ -1.68
KTN1-220ENST00000555172 NAXEQ8NCW5 288 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 GIMAP8Q8ND71 665 aaPredicted RBP4.55□□□□□ -1.68
KTN1-220ENST00000555172 GSTCDQ8NEC7 633 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 OR2W6PQ8NHA6 318 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 SLC35G2Q8TBE7 412 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 TBCBQ99426 244 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 ACO2Q99798 780 aaKnown RBP4.55□□□□□ -1.68
KTN1-220ENST00000555172 AP1M1Q9BXS5 423 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 SEZ6LQ9BYH1 1024 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 NMRK2Q9NPI5 230 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 C14orf119Q9NWQ9 140 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 CEP131Q9UPN4 1083 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 AFG3L2Q9Y4W6 797 aa4.55□□□□□ -1.68
KTN1-220ENST00000555172 TRIM75PA6NK02 468 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 FAM155AB1AL88 458 aaPredicted RBP4.54□□□□□ -1.68
KTN1-220ENST00000555172 NOP56O00567 594 aaKnown RBP4.54□□□□□ -1.68
KTN1-220ENST00000555172 NCAM2O15394 837 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 CBFA2T2O43439 604 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 ZEB2O60315 1214 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 CTNND1O60716 968 aaKnown RBP4.54□□□□□ -1.68
KTN1-220ENST00000555172 PPM1BO75688 479 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 ASLP04424 464 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 ITGAVP06756 1048 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 ZSCAN22P10073 491 aaPredicted RBP4.54□□□□□ -1.68
KTN1-220ENST00000555172 IGFALSP35858 605 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 TBX2Q13207 712 aaPredicted RBP4.54□□□□□ -1.68
KTN1-220ENST00000555172 KLF1Q13351 362 aaPredicted RBP4.54□□□□□ -1.68
KTN1-220ENST00000555172 SEPT2Q15019 361 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 AOC3Q16853 763 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 CDCA2Q69YH5 1023 aaPredicted RBP4.54□□□□□ -1.68
KTN1-220ENST00000555172 ABHD17CQ6PCB6 329 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 NSMFQ6X4W1 530 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 UBE3DQ7Z6J8 389 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 HSCBQ8IWL3 235 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 NETO1Q8TDF5 533 aa4.54□□□□□ -1.68
KTN1-220ENST00000555172 GCC1Q96CN9 775 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms