RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 NUP98P52948 1817 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 MYO1BO43795 1136 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 MCM4P33991 863 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 CCT4P50991 539 aaKnown RBP6.21□□□□□ -1.42
ATXN3-228ENST00000554592 PRMT2P55345 433 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 CAP1Q01518 475 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 CLCQ05315 142 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 KRT24Q2M2I5 525 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 ZNF792Q3KQV3 632 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 SFRP5Q5T4F7 317 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 CDH24Q86UP0 819 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
ATXN3-228ENST00000554592 CWC25Q9NXE8 425 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-228ENST00000554592 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 ST14Q9Y5Y6 855 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 AKAP11Q9UKA4 1901 aa6.21□□□□□ -1.42
ATXN3-228ENST00000554592 A0A1W2PPC1 479 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 DNAJA2O60884 412 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 RNASE1P07998 156 aaKnown RBP6.2□□□□□ -1.42
ATXN3-228ENST00000554592 TMPOP42166 694 aaKnown RBP6.2□□□□□ -1.42
ATXN3-228ENST00000554592 ZNF165P49910 485 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 CLCN7P51798 805 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 GTF2A2P52657 109 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 RBL2Q08999 1139 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 KIF22Q14807 665 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 PLCL1Q15111 1095 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 NBPF12Q5TAG4 269 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-228ENST00000554592 DIEXFQ68CQ4 756 aaKnown RBP6.2□□□□□ -1.42
ATXN3-228ENST00000554592 CCDC81Q6ZN84 652 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 REXO1Q8N1G1 1221 aaKnown RBP6.2□□□□□ -1.42
ATXN3-228ENST00000554592 HSPA12BQ96MM6 686 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 MYD88Q99836 296 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 ANKRD2Q9GZV1 360 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 PRO3102Q9H379 93 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 TPX2Q9ULW0 747 aaKnown RBP6.2□□□□□ -1.42
ATXN3-228ENST00000554592 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 LAS1LQ9Y4W2 734 aaKnown RBP6.2□□□□□ -1.42
ATXN3-228ENST00000554592 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
ATXN3-228ENST00000554592 CCL15-CCL14A0A0B4J2E2 113 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATXN3-228ENST00000554592 PLCG1P19174 1290 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 ETFBP38117 255 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 IGHMBP2P38935 993 aaKnown RBP6.19□□□□□ -1.42
ATXN3-228ENST00000554592 TXKP42681 527 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 RASA3Q14644 834 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 CCL15Q16663 113 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 GK5Q6ZS86 529 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 MFSD4AQ8N468 514 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 TTLL11Q8NHH1 800 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 SH3TC2Q8TF17 1288 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 CPLX3Q8WVH0 158 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 ASB11Q8WXH4 323 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 SHDQ96IW2 340 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 PRMT6Q96LA8 375 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-228ENST00000554592 Q96M66 194 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 EHMT1Q9H9B1 1298 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 CD209Q9NNX6 404 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 REV1Q9UBZ9 1251 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 PCDHB14Q9Y5E9 798 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 MRVI1Q9Y6F6 885 aa6.19□□□□□ -1.42
ATXN3-228ENST00000554592 COL1A1P02452 1464 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 CLRN2A0PK11 232 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 TLR2O60603 784 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 HTR3BO95264 441 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 PAPLNO95428 1278 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 DDX58O95786 925 aaKnown RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 GJB1P08034 283 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 CAPN2P17655 700 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 HOXD10P28358 340 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 KCNJ4P48050 445 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 CTSWP56202 376 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 FKBP1AP62942 108 aaKnown RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 LACTBP83111 547 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 TNK2Q07912 1038 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 TNFAIP1Q13829 316 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 CFAP100Q494V2 611 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 ZNF746Q6NUN9 644 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 SLFN12Q8IYM2 578 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 CYB5D2Q8WUJ1 264 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 COX4I2Q96KJ9 171 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 FERD3LQ96RJ6 166 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 SRRTQ9BXP5 876 aaKnown RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 CHMP4AQ9BY43 222 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 GREM2Q9H772 168 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 VEZTQ9HBM0 779 aa6.18□□□□□ -1.42
ATXN3-228ENST00000554592 ZCCHC17Q9NP64 241 aaKnown RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
ATXN3-228ENST00000554592 LAMB4A4D0S4 1761 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 ANKRD36CQ5JPF3 1778 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms