RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RRBP1Q9P2E9 1410 aaKnown RBP5.5□□□□□ -1.53
ATXN3-227ENST00000554491 K7ESM1 405 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 KIF20AO95235 890 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 EPHX1P07099 455 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 CNR2P34972 360 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 PUM1Q14671 1186 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATXN3-227ENST00000554491 ADAT2Q7Z6V5 191 aaKnown RBP5.5□□□□□ -1.53
ATXN3-227ENST00000554491 EXOC8Q8IYI6 725 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 RNF34Q969K3 372 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 SYT3Q9BQG1 590 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 MTA3Q9BTC8 594 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 SPATA6Q9NWH7 488 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-227ENST00000554491 CGGBP1Q9UFW8 167 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-227ENST00000554491 DDX41Q9UJV9 622 aaKnown RBP5.5□□□□□ -1.53
ATXN3-227ENST00000554491 SIT1Q9Y3P8 196 aa5.5□□□□□ -1.53
ATXN3-227ENST00000554491 LRPPRCP42704 1394 aaKnown RBP5.5□□□□□ -1.53
ATXN3-227ENST00000554491 RGPD8O14715 1765 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-227ENST00000554491 HFM1A2PYH4 1435 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 VPS8Q8N3P4 1428 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 KNDC1Q76NI1 1749 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 GOLGA6L3A6NEY3 463 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 C2orf71A6NGG8 1288 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 SEPHS1P49903 392 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 RALBP1Q15311 655 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 NBPF8Q3BBV2 869 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 HSP90AB3PQ58FF7 597 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 HEATR6Q6AI08 1181 aaKnown RBP5.49□□□□□ -1.53
ATXN3-227ENST00000554491 CABP7Q86V35 215 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 EGFL6Q8IUX8 553 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 TMTC2Q8N394 836 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 BORCS6Q96GS4 357 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 PEX11GQ96HA9 241 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 LNPKQ9C0E8 428 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 TMPRSS5Q9H3S3 457 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 RRP7BPQ9NSQ0 103 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 SH3BP1Q9Y3L3 701 aa5.49□□□□□ -1.53
ATXN3-227ENST00000554491 SPATA31A3Q5VYP0 1347 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 PEAK1Q9H792 1746 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 TRPM3Q9HCF6 1732 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-227ENST00000554491 TOPAZ1Q8N9V7 1692 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 ALS2Q96Q42 1657 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 A0A1W2PQH9 124 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 CACNB2Q08289 660 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-227ENST00000554491 PAK2Q13177 524 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 SMAD4Q13485 552 aaKnown RBP5.48□□□□□ -1.53
ATXN3-227ENST00000554491 MTERF4Q7Z6M4 381 aaKnown RBP5.48□□□□□ -1.53
ATXN3-227ENST00000554491 ZNF761Q86XN6 746 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-227ENST00000554491 NETO2Q8NC67 525 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 CPA5Q8WXQ8 436 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 KLHL6Q8WZ60 621 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 ZBTB8AQ96BR9 441 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 DDX11Q96FC9 970 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 CRBNQ96SW2 442 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 KRTAP17-1Q9BYP8 105 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 GBP3Q9H0R5 595 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 METTL5Q9NRN9 209 aaKnown RBP5.48□□□□□ -1.53
ATXN3-227ENST00000554491 GEMIN8Q9NWZ8 242 aaKnown RBP5.48□□□□□ -1.53
ATXN3-227ENST00000554491 EFR3BQ9Y2G0 817 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 BACE2Q9Y5Z0 518 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 KIF1BO60333 1816 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 WDR90Q96KV7 1748 aa5.48□□□□□ -1.53
ATXN3-227ENST00000554491 PARP4Q9UKK3 1724 aaKnown RBP5.48□□□□□ -1.53
ATXN3-227ENST00000554491 MAP3K5Q99683 1374 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 ANKRD30AQ9BXX3 1397 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 NPHP3-ACAD11A0A0J9YXS1 232 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 PPM1BO75688 479 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 NTRK1P04629 796 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 C8BP07358 591 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 HSPA6P17066 643 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 SARSP49591 514 aaKnown RBP5.47□□□□□ -1.53
ATXN3-227ENST00000554491 GJA9P57773 515 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 AMPD2Q01433 879 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 SLC7A5Q01650 507 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 SLC9A5Q14940 896 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 MBLAC2Q68D91 279 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 WWC2Q6AWC2 1192 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 ARHGEF39Q8N4T4 335 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 USP33Q8TEY7 942 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 GPR20Q99678 358 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 PNNQ9H307 717 aaKnown RBP5.47□□□□□ -1.53
ATXN3-227ENST00000554491 PHAXQ9H814 394 aaKnown RBP5.47□□□□□ -1.53
ATXN3-227ENST00000554491 NTMQ9P121 344 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 NUDT5Q9UKK9 219 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 CLTCL1P53675 1640 aa5.47□□□□□ -1.53
ATXN3-227ENST00000554491 WNK3Q9BYP7 1800 aa5.46□□□□□ -1.53
ATXN3-227ENST00000554491 COL24A1Q17RW2 1714 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 PHRF1Q9P1Y6 1649 aaKnown RBP5.46□□□□□ -1.54
ATXN3-227ENST00000554491 C7orf72A4D263 438 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 FUCA1P04066 466 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 PAMP19021 973 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 SOX9P48436 509 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 GIPRP48546 466 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 PRELPP51888 382 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 EIF6P56537 245 aaKnown RBP5.46□□□□□ -1.54
ATXN3-227ENST00000554491 DMTNQ08495 405 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 ZNF827Q17R98 1081 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 DNTTIP2Q5QJE6 756 aaKnown RBP5.46□□□□□ -1.54
ATXN3-227ENST00000554491 RBM15Q96T37 977 aaKnown RBP eCLIP5.46□□□□□ -1.54
ATXN3-227ENST00000554491 GORASP1Q9BQQ3 440 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 SYT17Q9BSW7 474 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms