RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 GPR37L1O60883 481 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 CD44P16070 742 aaKnown RBP10.13□□□□□ -0.79
TDP1-208ENST00000553989 GNAQP50148 359 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 IGBP1P78318 339 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 XRRA1Q6P2D8 792 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 FAM178BQ8IXR5 827 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 CDHR1Q96JP9 859 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 SENP7Q9BQF6 1050 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 LZTS2Q9BRK4 669 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 SPZ1Q9BXG8 430 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 OSBPL7Q9BZF2 842 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 CD320Q9NPF0 282 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 TUBE1Q9UJT0 475 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 TELO2Q9Y4R8 837 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 TAF6LQ9Y6J9 622 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 BDP1A6H8Y1 2624 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 ADGRA3Q8IWK6 1321 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 GRXCR2A6NFK2 248 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 PI4K2BG5E9Z4 385 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 M0QZ92 97 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 PIK3CDO00329 1044 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 PRC1O43663 620 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 PLEKHA8P1O95397 391 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 ALADP13716 330 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 RXRAP19793 462 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 IBSPP21815 317 aaPredicted RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 ANTXR2P58335 489 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 MTMR1Q13613 665 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 BTG3Q14201 252 aaPredicted RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 GRIK4Q16099 956 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 RUFY4Q6ZNE9 571 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 MB21D2Q8IYB1 491 aaPredicted RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 CMTR1Q8N1G2 835 aaKnown RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 IGDCC4Q8TDY8 1250 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 SEPT1Q8WYJ6 367 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 GPRASP2Q96D09 838 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 PABPC5Q96DU9 382 aaKnown RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 LARP6Q9BRS8 491 aaKnown RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 C11orf84Q9BUA3 381 aaPredicted RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 FAM49AQ9H0Q0 323 aaPredicted RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 PSTPIP2Q9H939 334 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 EHMT1Q9H9B1 1298 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 LY9Q9HBG7 655 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 C11orf16Q9NQ32 467 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 ERAP1Q9NZ08 941 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 RWDD3Q9Y3V2 267 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 RBM8AQ9Y5S9 174 aaKnown RBP10.12□□□□□ -0.79
TDP1-208ENST00000553989 DOCK5Q9H7D0 1870 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 BRWD1Q9NSI6 2320 aa10.12□□□□□ -0.79
TDP1-208ENST00000553989 MEIS2O14770 477 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 SGSM2O43147 1006 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 CHRNA1P02708 482 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 CALM1P0DP23 149 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 CALM2P0DP24 149 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 CALM3P0DP25 149 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 MCM5P33992 734 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 CLUL1Q15846 466 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 UBE2SQ16763 222 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 FAM26DQ5JW98 314 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 HEATR3Q7Z4Q2 680 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 RPAINQ86UA6 219 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 SKAP1Q86WV1 359 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 RAB11FIP4Q86YS3 637 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 CCDC82Q8N4S0 544 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 NEK9Q8TD19 979 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 DNAJB3Q8WWF6 145 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 MAP3K14Q99558 947 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 SMARCAD1Q9H4L7 1026 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 AZI2Q9H6S1 392 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 TRPC6Q9Y210 931 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 CDY2AQ9Y6F7 541 aa10.11□□□□□ -0.79
TDP1-208ENST00000553989 NLRC5Q86WI3 1866 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 COL4A6Q14031 1691 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 hCG_1642624A0A1W2PR95 340 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 DCXO43602 365 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 NCK2O43639 380 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 ATP9AO75110 1047 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 RB1P06400 928 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 KCNA2P16389 499 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 ITGB5P18084 799 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 SMARCA1P28370 1054 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 BMPR1AP36894 532 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 ADAM17P78536 824 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 LPIN1Q14693 890 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 TSHZ1Q6ZSZ6 1077 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 MICU3Q86XE3 530 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 TMTC2Q8N394 836 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 SRBD1Q8N5C6 995 aaKnown RBP10.1□□□□□ -0.79
TDP1-208ENST00000553989 MAP4K1Q92918 833 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 PPP2R3CQ969Q6 453 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 TMEM87BQ96K49 555 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 PHF12Q96QT6 1004 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 IGFLR1Q9H665 355 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 JPH1Q9HDC5 661 aaPredicted RBP10.1□□□□□ -0.79
TDP1-208ENST00000553989 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
TDP1-208ENST00000553989 SLC12A7Q9Y666 1083 aa10.1□□□□□ -0.79
TDP1-208ENST00000553989 RALGAPA2Q2PPJ7 1873 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms