RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 SAMM50Q9Y512 469 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 FRMPD4Q14CM0 1322 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 FRMD3A2A2Y4 597 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 SOWAHDA6NJG2 315 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 LGALS16A8MUM7 142 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 AKR1B15C9JRZ8 316 aaPredicted RBP14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 KCNA1Q09470 495 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 PSMD2Q13200 908 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 LRRC55Q6ZSA7 311 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 TOGARAM2Q6ZUX3 1019 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 MAEAQ7L5Y9 396 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 MIER3Q7Z3K6 550 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 PPFIBP1Q86W92 1011 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 KSR1Q8IVT5 923 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 MB21D1Q8N884 522 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 DESI2Q9BSY9 194 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 PRPF6O94906 941 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 TNNT1P13805 278 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 HOXD13P35453 343 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 UGCGQ16739 394 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 SH3D19Q5HYK7 790 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 PPP1R13BQ96KQ4 1090 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 TEX13BQ9BXU2 312 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 TUFT1Q9NNX1 390 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 CYP39A1Q9NYL5 469 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 MFAP3LO75121 409 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 ZCWPW2Q504Y3 356 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 GPIHBP1Q8IV16 184 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 CCDC155Q8N6L0 562 aa14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 NOC4LQ9BVI4 516 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-206ENST00000553888 LOC285556D6RIA3 1793 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 A0A0U1RQJ8 604 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 RGS20O76081 388 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 CCNE2O96020 404 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 NR3C2P08235 984 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 BCRP11274 1271 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 IREB2P48200 963 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 CNTN2Q02246 1040 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 SP4Q02446 784 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 EPHA7Q15375 998 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 ATRIPQ8WXE1 791 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 L3MBTL3Q96JM7 780 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 RIT2Q99578 217 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 RASSF10A6NK89 507 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 TRAF5O00463 557 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 SLC26A4O43511 780 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 C1orf186Q6ZWK4 172 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 PAGR1Q9BTK6 254 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 KCTD10Q9H3F6 313 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 ZNF408Q9H9D4 720 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 HOXC10Q9NYD6 342 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 ASTN1O14525 1302 aa14.12□□□□□ -0.15
VIPAS39-206ENST00000553888 NMT1P30419 496 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 ZC2HC1CQ53FD0 456 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 ACAD9Q9H845 621 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 ITIH6Q6UXX5 1313 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 FDX1P10109 184 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 SYCP1Q15431 976 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 RAD9BQ6WBX8 426 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 NYAP1Q6ZVC0 841 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 USP50Q70EL3 339 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 RBM46Q8TBY0 533 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 TAF1DQ9H5J8 278 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 MRPL44Q9H9J2 332 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 TTC26A0AVF1 554 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 GLTPD2A6NH11 291 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 TBCAO75347 108 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 PPP1R2P41236 205 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 OAZ1P54368 228 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 LRRC63Q05C16 580 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 TBC1D8BQ0IIM8 1120 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 UTP14CQ5TAP6 766 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 VSIG10LQ86VR7 867 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 CCDC112Q8NEF3 446 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 TSC1Q92574 1164 aa14.11□□□□□ -0.15
VIPAS39-206ENST00000553888 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 GCNT3O95395 438 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 NIPA1Q7RTP0 329 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 MYCT1Q8N699 235 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 OPTNQ96CV9 577 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 AGPAT5Q9NUQ2 364 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 MAP3K20Q9NYL2 800 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 LOXHD1Q8IVV2 1947 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 MCM3APO60318 1980 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 PTPN14Q15678 1187 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 MAP1SQ66K74 1059 aaPredicted RBP14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 ANKRD13AQ8IZ07 590 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 NACC1Q96RE7 527 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 TSG101Q99816 390 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 STK24Q9Y6E0 443 aa14.1□□□□□ -0.15
VIPAS39-206ENST00000553888 A0A0G2JLL6 359 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 ATP2A1O14983 1001 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 EPHB6O15197 1021 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 CCND2P30279 289 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 KRT9P35527 623 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 GJA5P36382 358 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 ERVK-24P63145 666 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms