RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 SAGE1Q9NXZ1 904 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 DNM3Q9UQ16 869 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 E9PMD0 336 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 GPR25O00155 361 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 SORBS3O60504 671 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 PSAPP07602 524 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 QARSP47897 775 aaKnown RBP13.14□□□□□ -0.31
NEK9-202ENST00000553823 C1QTNF8P60827 252 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 SP4Q02446 784 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 DPYDQ12882 1025 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 ACVR2BQ13705 512 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 CCL14Q16627 93 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 CELF3Q5SZQ8 465 aaKnown RBP13.14□□□□□ -0.31
NEK9-202ENST00000553823 MIS18BP1Q6P0N0 1132 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 SMARCE1Q969G3 411 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 NACC1Q96RE7 527 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 LRRC27Q9C0I9 530 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 ZSWIM4Q9H7M6 989 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 MLXIPQ9HAP2 919 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 FLRT1Q9NZU1 646 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 PCDHA5Q9Y5H7 936 aa13.14□□□□□ -0.31
NEK9-202ENST00000553823 DKC1O60832 514 aaKnown RBP eCLIP13.13□□□□□ -0.31
NEK9-202ENST00000553823 ATG7O95352 703 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 LYPLA2O95372 231 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 EYA4O95677 639 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
NEK9-202ENST00000553823 SUPT20HL2P0C7V6 817 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 PLA2G4BP0C869 781 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 HOXD10P28358 340 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 SARSP49591 514 aaKnown RBP13.13□□□□□ -0.31
NEK9-202ENST00000553823 FLT3LGP49771 235 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 PSMC5P62195 406 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 PSMC6P62333 389 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
NEK9-202ENST00000553823 TYRO3Q06418 890 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
NEK9-202ENST00000553823 NT5DC1Q5TFE4 455 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 IQSEC1Q6DN90 963 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 ABHD15Q6UXT9 468 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 DHX37Q8IY37 1157 aaKnown RBP13.13□□□□□ -0.31
NEK9-202ENST00000553823 SPATA20Q8TB22 786 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 CD99L2Q8TCZ2 262 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 C7orf25Q9BPX7 421 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 FUCA2Q9BTY2 467 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 BLZF1Q9H2G9 400 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 TSPY26PQ9H489 355 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
NEK9-202ENST00000553823 ZHX1Q9UKY1 873 aaPredicted RBP13.13□□□□□ -0.31
NEK9-202ENST00000553823 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
NEK9-202ENST00000553823 MYH11P35749 1972 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 A0A087WWV3 80 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 NOP56O00567 594 aaKnown RBP13.12□□□□□ -0.31
NEK9-202ENST00000553823 FKTNO75072 461 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 GH1P01241 217 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 IGHA2P01877 340 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 CASP1P29466 404 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 CYP2C19P33261 490 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 ADCYAP1R1P41586 468 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 SLC12A3P55017 1021 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 CAP1Q01518 475 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 PRKCZQ05513 592 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 CUL4BQ13620 913 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 LAMC2Q13753 1193 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 STX1AQ16623 288 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 UGCGQ16739 394 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 CCDC144BQ3MJ40 725 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 SWSAP1Q6NVH7 229 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 C4orf19Q8IY42 314 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
NEK9-202ENST00000553823 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 COPS5Q92905 334 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 ATP6V0A1Q93050 837 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 ERO1AQ96HE7 468 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 SPATA33Q96N06 139 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 GSDMAQ96QA5 445 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 TRIM9Q9C026 710 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 GABBR1Q9UBS5 961 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
NEK9-202ENST00000553823 GSTTP1A0A1W2PQM5 241 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 MYMKA6NI61 221 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 BIN1O00499 593 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 BACH1O14867 736 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
NEK9-202ENST00000553823 GNRH1P01148 92 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 RPN1P04843 607 aaKnown RBP13.11□□□□□ -0.31
NEK9-202ENST00000553823 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
NEK9-202ENST00000553823 NLRP12P59046 1061 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 ARHGAP1Q07960 439 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 DUSP28Q4G0W2 176 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 PRAMEF19Q5SWL8 479 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 MFSD14CQ5VZR4 134 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 CNNM4Q6P4Q7 775 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms