RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TRMT1LQ7Z2T5 733 aaKnown RBP20.76■□□□□ 0.91
SHMT2-206ENST00000553529 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
SHMT2-206ENST00000553529 GIMAP8Q8ND71 665 aaPredicted RBP20.76■□□□□ 0.91
SHMT2-206ENST00000553529 DNAJB3Q8WWF6 145 aa20.76■□□□□ 0.91
SHMT2-206ENST00000553529 LENG9Q96B70 501 aa20.76■□□□□ 0.91
SHMT2-206ENST00000553529 SLC9A7Q96T83 725 aa20.76■□□□□ 0.91
SHMT2-206ENST00000553529 FAM49AQ9H0Q0 323 aaPredicted RBP20.76■□□□□ 0.91
SHMT2-206ENST00000553529 KCNJ14Q9UNX9 436 aa20.76■□□□□ 0.91
SHMT2-206ENST00000553529 EMSYQ7Z589 1322 aa20.76■□□□□ 0.91
SHMT2-206ENST00000553529 CTDNEP1O95476 244 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 IGFBP4P22692 258 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 AK2P54819 239 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 AKAP17AQ02040 695 aaKnown RBP20.75■□□□□ 0.91
SHMT2-206ENST00000553529 TAP1Q03518 808 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 PRR16Q569H4 304 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.75■□□□□ 0.91
SHMT2-206ENST00000553529 NECAB1Q8N987 351 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 SDF4Q9BRK5 362 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 ERAP1Q9NZ08 941 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 NFASCO94856 1347 aa20.75■□□□□ 0.91
SHMT2-206ENST00000553529 EPB41L2O43491 1005 aaKnown RBP20.74■□□□□ 0.91
SHMT2-206ENST00000553529 CYP3A4P08684 503 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 GHRP10912 638 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 ATP4AP20648 1035 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 KCNJ6P48051 423 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 NLRP5P59047 1200 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 SSRP1Q08945 709 aaKnown RBP20.74■□□□□ 0.91
SHMT2-206ENST00000553529 MGAT3Q09327 533 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 PLEKHG4Q58EX7 1191 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 ZNF274Q96GC6 653 aaPredicted RBP20.74■□□□□ 0.91
SHMT2-206ENST00000553529 SMARCAD1Q9H4L7 1026 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 TUBE1Q9UJT0 475 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 MTUS1Q9ULD2 1270 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 REV3LO60673 3130 aa20.74■□□□□ 0.91
SHMT2-206ENST00000553529 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.73■□□□□ 0.91
SHMT2-206ENST00000553529 TLL1O43897 1013 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 BAIAP3O94812 1187 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 ERICH6BQ5W0A0 696 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 ABHD15Q6UXT9 468 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 MICALL1Q8N3F8 863 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 ARNTL2Q8WYA1 636 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 TRPC6Q9Y210 931 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 KAT6AQ92794 2004 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 NRCAMQ92823 1304 aa20.73■□□□□ 0.91
SHMT2-206ENST00000553529 MBLAC1A4D2B0 266 aaPredicted RBP20.72■□□□□ 0.91
SHMT2-206ENST00000553529 M0R2N6 131 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 IPO5O00410 1097 aaKnown RBP20.72■□□□□ 0.91
SHMT2-206ENST00000553529 MAFGO15525 162 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 ATG7O95352 703 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 TDP2O95551 362 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 CENPBP07199 599 aaPredicted RBP20.72■□□□□ 0.91
SHMT2-206ENST00000553529 FOSBP53539 338 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 ST3GAL1Q11201 340 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 MYOCDQ8IZQ8 938 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 OXER1Q8TDS5 423 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 PPP1R16BQ96T49 567 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 ZNF577Q9BSK1 485 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 LOXHD1Q8IVV2 1947 aa20.72■□□□□ 0.91
SHMT2-206ENST00000553529 IGKV6D-21A0A0A0MT36 114 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 FAM205CA6NFA0 338 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 CPLX1O14810 134 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 STAT5BP51692 787 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 IKBKEQ14164 716 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 LPIN1Q14693 890 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 SWSAP1Q6NVH7 229 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 PHOSPHO2Q8TCD6 241 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 TBCKQ8TEA7 893 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 GAS2L1Q99501 681 aaPredicted RBP20.71■□□□□ 0.91
SHMT2-206ENST00000553529 CDY2AQ9Y6F7 541 aa20.71■□□□□ 0.91
SHMT2-206ENST00000553529 ABHD14A-ACY1A0A1B0GW23 586 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 ZBTB42B2RXF5 422 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 DLL1O00548 723 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 BACH1O14867 736 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 MSH4O15457 936 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 UPP2O95045 317 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 GJB5O95377 273 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 GNA11P29992 359 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 UGCGQ16739 394 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 ME3Q16798 604 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 EARS2Q5JPH6 523 aaKnown RBP20.7■□□□□ 0.9
SHMT2-206ENST00000553529 FAM26DQ5JW98 314 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 NIPA1Q7RTP0 329 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 CCDC148Q8NFR7 591 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 GDPD5Q8WTR4 605 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 CCDC12Q8WUD4 166 aaPredicted RBP20.7■□□□□ 0.9
SHMT2-206ENST00000553529 ZBED2Q9BTP6 218 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 GLT8D2Q9H1C3 349 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 AZI2Q9H6S1 392 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 AGO3Q9H9G7 860 aaKnown RBP20.7■□□□□ 0.9
SHMT2-206ENST00000553529 PCDHA4Q9UN74 947 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 WDR81Q562E7 1941 aa20.7■□□□□ 0.9
SHMT2-206ENST00000553529 CHMP2AO43633 222 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 LPXNO60711 386 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 PFKFB2O60825 505 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 DEXIO95424 95 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 GNAT1P11488 350 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 CIITAP33076 1130 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 TRIM22Q8IYM9 498 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 LINC01599Q8WXQ3 324 aa20.69■□□□□ 0.9
SHMT2-206ENST00000553529 COL25A1Q9BXS0 654 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms