RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MEIS2O14770 477 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 EYA4O95677 639 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 GLP2RO95838 553 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 IGHDP01880 384 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 KCNA2P16389 499 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 CD52P31358 61 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 IGBP1P78318 339 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 MRPS6P82932 125 aaKnown RBP10.46□□□□□ -0.73
SYNE2-209ENST00000553308 TRDNQ13061 729 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 WTAPQ15007 396 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 PAN2Q504Q3 1202 aaKnown RBP10.46□□□□□ -0.73
SYNE2-209ENST00000553308 IER5LQ5T953 404 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 RSPH3Q86UC2 560 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 RTN4RL1Q86UN2 441 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-209ENST00000553308 NLRX1Q86UT6 975 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 CMTR2Q8IYT2 770 aaKnown RBP10.46□□□□□ -0.73
SYNE2-209ENST00000553308 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 SMRP1Q8NCR6 262 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 SPPL3Q8TCT6 385 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 P2RX5Q93086 422 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 FAM49AQ9H0Q0 323 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-209ENST00000553308 ERAP1Q9NZ08 941 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 PKD2L1Q9P0L9 805 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 BARX2Q9UMQ3 279 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-209ENST00000553308 PCDHGC5Q9Y5F6 944 aa10.46□□□□□ -0.73
SYNE2-209ENST00000553308 KMT2EQ8IZD2 1858 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 PLXNA4Q9HCM2 1894 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 ERICH2A1L162 156 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 TMEM221A6NGB7 291 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 M0R296 226 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 PIK3CDO00329 1044 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 CYP21A2P08686 494 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 ITGB5P18084 799 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 NRIP1P48552 1158 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 GATMP50440 423 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 ANTXR2P58335 489 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 XRRA1Q6P2D8 792 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 TRIM67Q6ZTA4 783 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 BMP8AQ7Z5Y6 402 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 RBM23Q86U06 439 aaKnown RBP10.45□□□□□ -0.74
SYNE2-209ENST00000553308 NPAS4Q8IUM7 802 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 EFHBQ8N7U6 833 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 KLHL23Q8NBE8 558 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 GIMAP8Q8ND71 665 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-209ENST00000553308 POF1BQ8WVV4 589 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 SEPT1Q8WYJ6 367 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 GLG1Q92896 1179 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 CUL5Q93034 780 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 PPP2R3CQ969Q6 453 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 GPRASP2Q96D09 838 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 MYL10Q9BUA6 226 aa10.45□□□□□ -0.74
SYNE2-209ENST00000553308 RWDD1Q9H446 243 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-209ENST00000553308 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-209ENST00000553308 LOC730098B7Z3J9 87 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 INSRRP14616 1297 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 ZXDAP98168 799 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 RBM10P98175 930 aaKnown RBP10.44□□□□□ -0.74
SYNE2-209ENST00000553308 PTH1RQ03431 593 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 TMEM62Q0P6H9 643 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 COASYQ13057 564 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 NAALADL2Q58DX5 795 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 CATIPQ7Z7H3 387 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 RALYLQ86SE5 291 aaKnown RBP10.44□□□□□ -0.74
SYNE2-209ENST00000553308 TRAPPC12Q8WVT3 735 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 PBXIP1Q96AQ6 731 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 RRP36Q96EU6 259 aaKnown RBP10.44□□□□□ -0.74
SYNE2-209ENST00000553308 PCYT2Q99447 389 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 SPZ1Q9BXG8 430 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 SMARCAD1Q9H4L7 1026 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 TRPV2Q9Y5S1 764 aa10.44□□□□□ -0.74
SYNE2-209ENST00000553308 U3KPZ7 1027 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-209ENST00000553308 LOXHD1Q8IVV2 1947 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 IGSF9BQ9UPX0 1349 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 E7EWF7 191 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 PLEKHA8P1O95397 391 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 SCG2P13521 617 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 GSPT1P15170 499 aaKnown RBP10.43□□□□□ -0.74
SYNE2-209ENST00000553308 IBSPP21815 317 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-209ENST00000553308 PTPN5P54829 565 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 TCF15Q12870 199 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 PAK2Q13177 524 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 MTMR1Q13613 665 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 CBX2Q14781 532 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-209ENST00000553308 SART3Q15020 963 aaKnown RBP10.43□□□□□ -0.74
SYNE2-209ENST00000553308 UBE2SQ16763 222 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 SUGP1Q8IWZ8 645 aaKnown RBP10.43□□□□□ -0.74
SYNE2-209ENST00000553308 ZNF654Q8IZM8 581 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 VN1R2Q8NFZ6 395 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 NCOA7Q8NI08 942 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 IGDCC4Q8TDY8 1250 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 CDHR1Q96JP9 859 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 SNX27Q96L92 541 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 FTHL17Q9BXU8 183 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 TMX1Q9H3N1 280 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 SEC63Q9UGP8 760 aaKnown RBP10.43□□□□□ -0.74
SYNE2-209ENST00000553308 PADI3Q9ULW8 664 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 UBIAD1Q9Y5Z9 338 aa10.43□□□□□ -0.74
SYNE2-209ENST00000553308 C5orf42Q9H799 3197 aa10.42□□□□□ -0.74
SYNE2-209ENST00000553308 RRN3P2A6NIE6 340 aa10.42□□□□□ -0.74
SYNE2-209ENST00000553308 M0QZ92 97 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms