RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CDKAL1Q5VV42 579 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 SPTY2D1Q68D10 685 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-208ENST00000553278 LILRA6Q6PI73 481 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 ARHGAP27Q6ZUM4 889 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 OTOP3Q7RTS5 596 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 NLRP10Q86W26 655 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 SMAP1Q8IYB5 467 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-208ENST00000553278 ARMC10Q8N2F6 343 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 ANKRD42Q8N9B4 389 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 DIS3LQ8TF46 1054 aaKnown RBP7.2□□□□□ -1.26
SCFD1-208ENST00000553278 DPF3Q92784 378 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 TBC1D32Q96NH3 1257 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 HERPUD2Q9BSE4 406 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-208ENST00000553278 SRPK3Q9UPE1 567 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 DMTF1Q9Y222 760 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 MAN2B1O00754 1011 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 DHX15O43143 795 aaKnown RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 CLASP2O75122 1294 aaKnown RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 HRGP04196 525 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 POU2F2P09086 479 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 SETSIPP0DME0 302 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 C5AR1P21730 350 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 PTX3P26022 381 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 PPM1FP49593 454 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 CYP27A1Q02318 531 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 STK3Q13188 491 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 KRT72Q14CN4 511 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 FSCN1Q16658 493 aaKnown RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 TOR2AQ5JU69 321 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 HLA-DQA1Q5Y7H0 255 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 CCDC149Q6ZUS6 474 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 CLEC10AQ8IUN9 316 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 GRAMD1CQ8IYS0 662 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 Q8N1Y9 231 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 DLG3Q92796 817 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 ACO2Q99798 780 aaKnown RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 NAA15Q9BXJ9 866 aaKnown RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 GTPBP4Q9BZE4 634 aaKnown RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 CASS4Q9NQ75 786 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 ZNF277Q9NRM2 450 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-208ENST00000553278 KCNH7Q9NS40 1196 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 DUSP13Q9UII6 198 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 MSRAQ9UJ68 235 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 ANAPC4Q9UJX5 808 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 DSEQ9UL01 958 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 NUB1Q9Y5A7 615 aa7.19□□□□□ -1.26
SCFD1-208ENST00000553278 TCRBV5S4A2TA0A5A2 114 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 LCHNA4D1U4 455 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 NKRFO15226 690 aaKnown RBP eCLIP7.18□□□□□ -1.26
SCFD1-208ENST00000553278 NDUFS2O75306 463 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 MYBP10242 640 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 MTHFD2P13995 350 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 CD53P19397 219 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 MTNR1BP49286 362 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 FAM193AP78312 1265 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 TMEM132BQ14DG7 1078 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 LONRF1Q17RB8 773 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 PLA2G4EQ3MJ16 856 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 FSTL4Q6MZW2 842 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 ESRP1Q6NXG1 681 aaKnown RBP7.18□□□□□ -1.26
SCFD1-208ENST00000553278 THAP5Q7Z6K1 395 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 ZAR1Q86SH2 424 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 NME9Q86XW9 330 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 DZIP1LQ8IYY4 767 aaKnown RBP7.18□□□□□ -1.26
SCFD1-208ENST00000553278 CPXCR1Q8N123 301 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 SVOPQ8N4V2 548 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 CAMKK1Q8N5S9 505 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 QRSL1Q9H0R6 528 aaKnown RBP7.18□□□□□ -1.26
SCFD1-208ENST00000553278 MARCH2Q9P0N8 246 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 ZSWIM5Q9P217 1185 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 ATP23Q9Y6H3 246 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 X6R8D5 127 aa7.18□□□□□ -1.26
SCFD1-208ENST00000553278 A6NNZ2 444 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 KRIT1O00522 736 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 DTNBO60941 627 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 ZKSCAN1P17029 563 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-208ENST00000553278 FPR2P25090 351 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 RPL10P27635 214 aaKnown RBP7.17□□□□□ -1.26
SCFD1-208ENST00000553278 HALP42357 657 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 SLC5A3P53794 718 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 KIF23Q02241 960 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-208ENST00000553278 LLGL1Q15334 1064 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 EPHA7Q15375 998 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 UGT8Q16880 541 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 GAB4Q2WGN9 574 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 UAP1L1Q3KQV9 507 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 CPZQ66K79 652 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 TEX2Q8IWB9 1127 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 PIP4K2CQ8TBX8 421 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 RTF1Q92541 710 aaKnown RBP7.17□□□□□ -1.26
SCFD1-208ENST00000553278 GATA6Q92908 595 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 C1GALT1C1Q96EU7 318 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 ZNF496Q96IT1 587 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-208ENST00000553278 FAM83CQ9BQN1 747 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 SELENOOQ9BVL4 669 aa7.17□□□□□ -1.26
SCFD1-208ENST00000553278 ABHD14A-ACY1A0A1B0GW23 586 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 TMEM82A0PJX8 343 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms