RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ATP4AP20648 1035 aa21.9■■□□□ 1.1
PTCH1-227ENST00000553256 PLCB4Q15147 1175 aa21.9■■□□□ 1.1
PTCH1-227ENST00000553256 DEFB128Q7Z7B8 93 aa21.9■■□□□ 1.1
PTCH1-227ENST00000553256 CCDC60Q8IWA6 550 aaPredicted RBP21.9■■□□□ 1.1
PTCH1-227ENST00000553256 CCDC155Q8N6L0 562 aa21.9■■□□□ 1.1
PTCH1-227ENST00000553256 SLC5A5Q92911 643 aa21.9■■□□□ 1.1
PTCH1-227ENST00000553256 TBC1D22BQ9NU19 505 aa21.9■■□□□ 1.1
PTCH1-227ENST00000553256 TDP2O95551 362 aa21.89■■□□□ 1.09
PTCH1-227ENST00000553256 FAM26DQ5JW98 314 aa21.89■■□□□ 1.09
PTCH1-227ENST00000553256 ZNF746Q6NUN9 644 aaPredicted RBP21.89■■□□□ 1.09
PTCH1-227ENST00000553256 DEFB123Q8N688 67 aa21.89■■□□□ 1.09
PTCH1-227ENST00000553256 GUCD1Q96NT3 240 aa21.89■■□□□ 1.09
PTCH1-227ENST00000553256 UIMC1Q96RL1 719 aa21.89■■□□□ 1.09
PTCH1-227ENST00000553256 ZNF577Q9BSK1 485 aa21.89■■□□□ 1.09
PTCH1-227ENST00000553256 CAND2O75155 1236 aa21.88■■□□□ 1.09
PTCH1-227ENST00000553256 PARNO95453 639 aaKnown RBP21.88■■□□□ 1.09
PTCH1-227ENST00000553256 MARK3P27448 753 aa21.88■■□□□ 1.09
PTCH1-227ENST00000553256 PBX2P40425 430 aa21.88■■□□□ 1.09
PTCH1-227ENST00000553256 STAT5BP51692 787 aa21.88■■□□□ 1.09
PTCH1-227ENST00000553256 RUFY4Q6ZNE9 571 aa21.88■■□□□ 1.09
PTCH1-227ENST00000553256 KRT25Q7Z3Z0 450 aa21.88■■□□□ 1.09
PTCH1-227ENST00000553256 ETNPPLQ8TBG4 499 aa21.88■■□□□ 1.09
PTCH1-227ENST00000553256 PBX4Q9BYU1 374 aa21.88■■□□□ 1.09
PTCH1-227ENST00000553256 MAFBQ9Y5Q3 323 aaPredicted RBP21.88■■□□□ 1.09
PTCH1-227ENST00000553256 ZBTB42B2RXF5 422 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 PSMD10O75832 226 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 INSRRP14616 1297 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 MGAT3Q09327 533 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 PPFIA1Q13136 1202 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 GRIK4Q16099 956 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 GLG1Q92896 1179 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 GJA10Q969M2 543 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 RIT2Q99578 217 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 SEMA6BQ9H3T3 888 aa21.87■■□□□ 1.09
PTCH1-227ENST00000553256 TMEM265A0A087WTH1 108 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 FAM205CA6NFA0 338 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 DDX39AO00148 427 aaKnown RBP21.86■■□□□ 1.09
PTCH1-227ENST00000553256 GNAT1P11488 350 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 THPOP40225 353 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 SLC26A2P50443 739 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 NONOQ15233 471 aaKnown RBP eCLIP21.86■■□□□ 1.09
PTCH1-227ENST00000553256 INF2Q27J81 1249 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 SMAP1Q8IYB5 467 aaPredicted RBP21.86■■□□□ 1.09
PTCH1-227ENST00000553256 WASF1Q92558 559 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 ZBTB10Q96DT7 871 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 EYSQ5T1H1 3165 aa21.86■■□□□ 1.09
PTCH1-227ENST00000553256 IGSF9BQ9UPX0 1349 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 RSPH10B2B2RC85 870 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 SLC37A4O43826 429 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 RSPH10BP0C881 870 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 DNAJB2P25686 324 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 KRT76Q01546 638 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 NR5A1Q13285 461 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 PPP4R3AQ6IN85 833 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 KCNMB3Q9NPA1 279 aa21.85■■□□□ 1.09
PTCH1-227ENST00000553256 YBX2Q9Y2T7 364 aaKnown RBP21.85■■□□□ 1.09
PTCH1-227ENST00000553256 BAIAP3O94812 1187 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 CHRNA1P02708 482 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 MMP1P03956 469 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 PLEKHG4Q58EX7 1191 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 TAF2Q6P1X5 1199 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 CNKSR3Q6P9H4 555 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 ATP8B4Q8TF62 1192 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 TBC1D32Q96NH3 1257 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 LLPHQ9BRT6 129 aaKnown RBP21.84■■□□□ 1.09
PTCH1-227ENST00000553256 AZI2Q9H6S1 392 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 TUBE1Q9UJT0 475 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 PCDHA10Q9Y5I2 948 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 PTPRSQ13332 1948 aa21.84■■□□□ 1.09
PTCH1-227ENST00000553256 RRN3P2A6NIE6 340 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 ZNF862O60290 1169 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 CD2BP2O95400 341 aaKnown RBP21.83■■□□□ 1.09
PTCH1-227ENST00000553256 XBP1P17861 261 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 RABEP1Q15276 862 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 SWSAP1Q6NVH7 229 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 MIS18BP1Q6P0N0 1132 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 CCDC83Q8IWF9 413 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 TRAPPC12Q8WVT3 735 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 ZSCAN31Q96LW9 406 aaPredicted RBP21.83■■□□□ 1.09
PTCH1-227ENST00000553256 MTIF3Q9H2K0 278 aaKnown RBP21.83■■□□□ 1.09
PTCH1-227ENST00000553256 UNC45AQ9H3U1 944 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 ZNF302Q9NR11 478 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 SLC4A7Q9Y6M7 1214 aa21.83■■□□□ 1.09
PTCH1-227ENST00000553256 SIP14410 1827 aa21.83■■□□□ 1.08
PTCH1-227ENST00000553256 POTEB3A0JP26 581 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 WNT7AO00755 349 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 STBD1O95210 358 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 WDR5P61964 334 aaKnown RBP21.82■■□□□ 1.08
PTCH1-227ENST00000553256 KRT40Q6A162 431 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 POTEBQ6S5H4 581 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 PIK3AP1Q6ZUJ8 805 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 NEK8Q86SG6 692 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 PHOSPHO2Q8TCD6 241 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 HAS1Q92839 578 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 SH2B1Q9NRF2 756 aaPredicted RBP21.82■■□□□ 1.08
PTCH1-227ENST00000553256 PCDHA2Q9Y5H9 948 aa21.82■■□□□ 1.08
PTCH1-227ENST00000553256 BTBD18B2RXH4 712 aa21.81■■□□□ 1.08
PTCH1-227ENST00000553256 HBP1O60381 514 aa21.81■■□□□ 1.08
PTCH1-227ENST00000553256 UGCGQ16739 394 aa21.81■■□□□ 1.08
PTCH1-227ENST00000553256 ZNF697Q5TEC3 545 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms