RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 OTUD6AQ7L8S5 288 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 MIER3Q7Z3K6 550 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 NME8Q8N427 588 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 ETNPPLQ8TBG4 499 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 ATP8B4Q8TF62 1192 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 LENG9Q96B70 501 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 HIPK3Q9H422 1215 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 PRDM5Q9NQX1 630 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 RNF216Q9NWF9 866 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 GSTTP1A0A1W2PQM5 241 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 M0QZ92 97 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 DHX15O43143 795 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 SLC26A4O43511 780 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 GAS2O43903 313 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 EFCAB14O75071 495 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 CD2BP2O95400 341 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 P4HBP07237 508 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 ZNF286BP0CG31 522 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 XRCC6P12956 609 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 PRPHP41219 470 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 CHMP4BP1P59074 171 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 PSMC5P62195 406 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 GUCY1B3Q02153 619 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 PPFIA1Q13136 1202 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 PDIA5Q14554 519 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 XKR3Q5GH77 459 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 ARL6IP4Q66PJ3 421 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 POTEBQ6S5H4 581 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 RPAINQ86UA6 219 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 OXER1Q8TDS5 423 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 KAT2BQ92831 832 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 PDLIM7Q9NR12 457 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 PKD2L1Q9P0L9 805 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
TRAFD1-208ENST00000552890 KAT6AQ92794 2004 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 STX6O43752 255 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 TDP2O95551 362 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 OR52Z1P0C646 297 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 SMIM10L2AP0DMW4 78 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 SMIM10L2BP0DMW5 78 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 ACTN1P12814 892 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 MCM7P33993 719 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 QARSP47897 775 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 DNM2P50570 870 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 RBL2Q08999 1139 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 FAAP100Q0VG06 881 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 EPHA7Q15375 998 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 MFSD5Q6N075 450 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 SWSAP1Q6NVH7 229 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 PSRC1Q6PGN9 363 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 USP38Q8NB14 1042 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 ZFP91Q96JP5 570 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 CCDC43Q96MW1 224 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 ZSWIM4Q9H7M6 989 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 TTC12Q9H892 705 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 HDAC6Q9UBN7 1215 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 TBX21Q9UL17 535 aa11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 MAFBQ9Y5Q3 323 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-208ENST00000552890 BRCA2P51587 3418 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 VPS37CA5D8V6 355 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 H0YGN5 161 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 DDX39AO00148 427 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 B4GALT4O60513 344 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 SYT1P21579 422 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 HOXC8P31273 242 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 PSMC6P62333 389 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 FPGSQ05932 587 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 TMEM63BQ5T3F8 832 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 IER5Q5VY09 327 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 DTHD1Q6ZMT9 781 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 SERINC5Q86VE9 423 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 AK8Q96MA6 479 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 ZNF396Q96N95 335 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 KCNG1Q9UIX4 513 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 TUBE1Q9UJT0 475 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 SQORQ9Y6N5 450 aa11.53□□□□□ -0.56
TRAFD1-208ENST00000552890 SLC37A4O43826 429 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 CCNE2O96020 404 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 SELPP16109 830 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 ATP2B1P20020 1258 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.573e-6■■■■□ 19.5
TRAFD1-208ENST00000552890 FOSBP53539 338 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 GRIK4Q16099 956 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 B3GNT9Q6UX72 402 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 C4orf19Q8IY42 314 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 MTMR9Q96QG7 549 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 MAP7D2Q96T17 732 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 NOC4LQ9BVI4 516 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 UBE2OQ9C0C9 1292 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 TRPV6Q9H1D0 765 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 RNPEPQ9H4A4 650 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 GABBR1Q9UBS5 961 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 PCDHA2Q9Y5H9 948 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 MORC2Q9Y6X9 1032 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 GRIN2DO15399 1336 aa11.52□□□□□ -0.57
TRAFD1-208ENST00000552890 SMIM35A0A1B0GVV1 85 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 MBLAC1A4D2B0 266 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms