RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SPATA31C2B4DYI2 1134 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 LPXNO60711 386 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 CHMLP26374 656 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 ICAM3P32942 547 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 MCM5P33992 734 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 CTNNB1P35222 781 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 ANP32AP39687 249 aaKnown RBP9.98□□□□□ -0.81
TMEM116-217ENST00000552801 PLA2G5P39877 138 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 PPFIA1Q13136 1202 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 NBR1Q14596 966 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 GPNMBQ14956 572 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 EPC2Q52LR7 807 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 PCNX4Q63HM2 1172 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
TMEM116-217ENST00000552801 TAF2Q6P1X5 1199 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 SPRED2Q7Z698 418 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 ZNF654Q8IZM8 581 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 BANK1Q8NDB2 785 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 GPKOWQ92917 476 aaPredicted RBP eCLIP9.98□□□□□ -0.81
TMEM116-217ENST00000552801 WNT8BQ93098 351 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 PPP2R3CQ969Q6 453 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 IL17RAQ96F46 866 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 IPO9Q96P70 1041 aaKnown RBP9.98□□□□□ -0.81
TMEM116-217ENST00000552801 INPP4AQ96PE3 977 aaPredicted RBP9.98□□□□□ -0.81
TMEM116-217ENST00000552801 UIMC1Q96RL1 719 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 KCNK17Q96T54 332 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 GPR20Q99678 358 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 SPZ1Q9BXG8 430 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 KRTAP3-3Q9BYR6 98 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 KRTAP3-2Q9BYR7 98 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 AZI2Q9H6S1 392 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 PSTPIP2Q9H939 334 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 ERAP1Q9NZ08 941 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 NLRC5Q86WI3 1866 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 NCK2O43639 380 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 PRC1O43663 620 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 RPLP2P05387 115 aaKnown RBP9.97□□□□□ -0.81
TMEM116-217ENST00000552801 ALADP13716 330 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 MARK3P27448 753 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 TCF7P36402 384 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-217ENST00000552801 MRPS9P82933 396 aaKnown RBP9.97□□□□□ -0.81
TMEM116-217ENST00000552801 PTH1RQ03431 593 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 TROAPQ12815 778 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 MTMR1Q13613 665 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 MBTPS1Q14703 1052 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 LEXMQ3ZCV2 418 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 USP17L6PQ6QN14 398 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 TRIM50Q86XT4 487 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 TMEM192Q8IY95 271 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 GJD3Q8N144 294 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 LMBR1Q8WVP7 490 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 TOP1MTQ969P6 601 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 GPRASP2Q96D09 838 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 MAP3K14Q99558 947 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 SENP7Q9BQF6 1050 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 C11orf84Q9BUA3 381 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-217ENST00000552801 SMARCAD1Q9H4L7 1026 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 NSUN3Q9H649 340 aaKnown RBP9.97□□□□□ -0.81
TMEM116-217ENST00000552801 EPHX3Q9H6B9 360 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 PKD2L1Q9P0L9 805 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 RBM8AQ9Y5S9 174 aaKnown RBP9.97□□□□□ -0.81
TMEM116-217ENST00000552801 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 CHD9Q3L8U1 2897 aa9.97□□□□□ -0.81
TMEM116-217ENST00000552801 H3BNC9 293 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 PIK3CDO00329 1044 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 CYTH3O43739 400 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 GHRP10912 638 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 GSPT1P15170 499 aaKnown RBP9.96□□□□□ -0.82
TMEM116-217ENST00000552801 SMARCA1P28370 1054 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 IGBP1P78318 339 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 HTRA4P83105 476 aaPredicted RBP9.96□□□□□ -0.82
TMEM116-217ENST00000552801 TCTN1Q2MV58 587 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 IER5Q5VY09 327 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 HEATR3Q7Z4Q2 680 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 SEPT1Q8WYJ6 367 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 TMEM87BQ96K49 555 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 SDF4Q9BRK5 362 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 LRFN3Q9BTN0 628 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 MYL10Q9BUA6 226 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 CLDND1Q9NY35 253 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 TCEAL9Q9UHQ7 104 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 TUBE1Q9UJT0 475 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 NCOR1O75376 2440 aa9.96□□□□□ -0.82
TMEM116-217ENST00000552801 RALGAPA2Q2PPJ7 1873 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 RRN3P2A6NIE6 340 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 H3BQ06 376 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-217ENST00000552801 SGSM2O43147 1006 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 CSPG5O95196 566 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 RB1P06400 928 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 IBSPP21815 317 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-217ENST00000552801 ZNF76P36508 570 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 FGD1P98174 961 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 BTG3Q14201 252 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-217ENST00000552801 HIC1Q14526 733 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 GRIK4Q16099 956 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 CCDC82Q8N4S0 544 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 IGDCC4Q8TDY8 1250 aa9.95□□□□□ -0.82
TMEM116-217ENST00000552801 MTA3Q9BTC8 594 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms