RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 USTQ9Y2C2 406 aa14.6□□□□□ -0.07
SNRPF-204ENST00000552085 FRMPD2Q68DX3 1309 aaPredicted RBP14.6□□□□□ -0.07
SNRPF-204ENST00000552085 NMT2O60551 498 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 GGPS1O95749 300 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 LGALS2P05162 132 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 SLC3A2P08195 630 aaKnown RBP14.59□□□□□ -0.07
SNRPF-204ENST00000552085 ATP5JP18859 108 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 MGAT3Q09327 533 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 TBC1D8BQ0IIM8 1120 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 HSP90AB4PQ58FF6 505 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 SPOUT1Q5T280 376 aaKnown RBP14.59□□□□□ -0.07
SNRPF-204ENST00000552085 SYTL5Q8TDW5 730 aaPredicted RBP14.59□□□□□ -0.07
SNRPF-204ENST00000552085 TBC1D5Q92609 795 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 CYP26B1Q9NR63 512 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 FASNP49327 2511 aaKnown RBP14.59□□□□□ -0.07
SNRPF-204ENST00000552085 DOCK5Q9H7D0 1870 aa14.59□□□□□ -0.07
SNRPF-204ENST00000552085 TSPY2A6NKD2 308 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 ABCB7O75027 752 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 EOMESO95936 686 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 APPP05067 770 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 WEE2P0C1S8 567 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 EIF2AK2P19525 551 aaKnown RBP14.58□□□□□ -0.08
SNRPF-204ENST00000552085 RFX1P22670 979 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 GATMP50440 423 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 ADAM17P78536 824 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 USH1GQ495M9 461 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 PPM1JQ5JR12 505 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 ARHGEF16Q5VV41 709 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 TSHZ1Q6ZSZ6 1077 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 RTN4RL1Q86UN2 441 aaPredicted RBP14.58□□□□□ -0.08
SNRPF-204ENST00000552085 THNSL1Q8IYQ7 743 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 DBR1Q9UK59 544 aaKnown RBP14.58□□□□□ -0.08
SNRPF-204ENST00000552085 CACNA1IQ9P0X4 2223 aa14.58□□□□□ -0.08
SNRPF-204ENST00000552085 HIDE1A8MVS5 230 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 NR3C2P08235 984 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 GNAT2P19087 354 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 NOVP48745 357 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 ARHGAP4P98171 946 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 APOBRQ0VD83 1088 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 FBXO47Q5MNV8 452 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 KCNV1Q6PIU1 500 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 C1orf210Q8IVY1 113 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 OSBP2Q969R2 916 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 LZTS1Q9Y250 596 aa14.57□□□□□ -0.08
SNRPF-204ENST00000552085 SUPT16HQ9Y5B9 1047 aaKnown RBP14.57□□□□□ -0.08
SNRPF-204ENST00000552085 GPAA1O43292 621 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 SCG2P13521 617 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 ZKSCAN2Q63HK3 967 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 KIAA1841Q6NSI8 718 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 CEP85Q6P2H3 762 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 IFNL3Q8IZI9 196 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 LMBR1Q8WVP7 490 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 SECISBP2LQ93073 1101 aaKnown RBP14.56□□□□□ -0.08
SNRPF-204ENST00000552085 KIF1BPQ96EK5 621 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 BORCS6Q96GS4 357 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 TCF25Q9BQ70 676 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 FTHL17Q9BXU8 183 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 AGO3Q9H9G7 860 aaKnown RBP14.56□□□□□ -0.08
SNRPF-204ENST00000552085 MLXIPQ9HAP2 919 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 NGRNQ9NPE2 291 aaKnown RBP14.56□□□□□ -0.08
SNRPF-204ENST00000552085 ENTPD7Q9NQZ7 604 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 LRFN2Q9ULH4 789 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 HCFC2Q9Y5Z7 792 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 CCDC171Q6TFL3 1326 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 MIA3Q5JRA6 1907 aa14.56□□□□□ -0.08
SNRPF-204ENST00000552085 GPR179Q6PRD1 2367 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 KRBA1A5PL33 1030 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 PATL2C9JE40 543 aaKnown RBP14.55□□□□□ -0.08
SNRPF-204ENST00000552085 UBA1P22314 1058 aaKnown RBP14.55□□□□□ -0.08
SNRPF-204ENST00000552085 CD52P31358 61 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 SP2Q02086 613 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 PPARAQ07869 468 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 SPECC1Q5M775 1068 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 ATAT1Q5SQI0 421 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 RARS2Q5T160 578 aaKnown RBP14.55□□□□□ -0.08
SNRPF-204ENST00000552085 TAF2Q6P1X5 1199 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 RUFY4Q6ZNE9 571 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 RSPH3Q86UC2 560 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 COLGALT1Q8NBJ5 622 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 MRPS27Q92552 414 aaKnown RBP14.55□□□□□ -0.08
SNRPF-204ENST00000552085 APPBP2Q92624 585 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 ACSF2Q96CM8 615 aaPredicted RBP14.55□□□□□ -0.08
SNRPF-204ENST00000552085 USP26Q9BXU7 913 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 PXMP2Q9NR77 195 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 WNT16Q9UBV4 365 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 PUF60Q9UHX1 559 aaKnown RBP14.55□□□□□ -0.08
SNRPF-204ENST00000552085 PATJQ8NI35 1801 aa14.55□□□□□ -0.08
SNRPF-204ENST00000552085 SPTLC1O15269 473 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 DCNP07585 359 aaKnown RBP14.54□□□□□ -0.08
SNRPF-204ENST00000552085 PLCB3Q01970 1234 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 XRRA1Q6P2D8 792 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 NACAP1Q9BZK3 213 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 TBC1D17Q9HA65 648 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 KCNK12Q9HB15 430 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 DLGAP2Q9P1A6 1054 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 ANGPTL2Q9UKU9 493 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 USP18Q9UMW8 372 aa14.54□□□□□ -0.08
SNRPF-204ENST00000552085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.54□□□□□ -0.08
SNRPF-204ENST00000552085 CDY2AQ9Y6F7 541 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms