RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 P2RX5Q93086 422 aa16.31■□□□□ 0.2
CHMP1A-210ENST00000551981 ZNF689Q96CS4 500 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-210ENST00000551981 FBXL18Q96ME1 805 aa16.31■□□□□ 0.2
CHMP1A-210ENST00000551981 MAP3K14Q99558 947 aa16.31■□□□□ 0.2
CHMP1A-210ENST00000551981 LZTS2Q9BRK4 669 aa16.31■□□□□ 0.2
CHMP1A-210ENST00000551981 SMARCAD1Q9H4L7 1026 aa16.31■□□□□ 0.2
CHMP1A-210ENST00000551981 MBLAC1A4D2B0 266 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 E7EWF7 191 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 STXBP3O00186 592 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 MEIS2O14770 477 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 CSPG5O95196 566 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 KCNA2P16389 499 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 MARK3P27448 753 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 SMARCA1P28370 1054 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 NDUFV1P49821 464 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 MRPS6P82932 125 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 IER5Q5VY09 327 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 CMTR2Q8IYT2 770 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 TNPO1Q92973 898 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 FTHL17Q9BXU8 183 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 MUTYHQ9UIF7 546 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 PLAGL2Q9UPG8 496 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 CDY2AQ9Y6F7 541 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 KIAA1671Q9BY89 1806 aa16.3■□□□□ 0.2
CHMP1A-210ENST00000551981 RRN3P2A6NIE6 340 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 M0QZ92 97 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 TBX10O75333 385 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 DDAH1O94760 285 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 ADAM15Q13444 863 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 RNF135Q8IUD6 432 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 NPAS4Q8IUM7 802 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 PSTPIP2Q9H939 334 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 MRPL42Q9Y6G3 142 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 SQORQ9Y6N5 450 aa16.29■□□□□ 0.2
CHMP1A-210ENST00000551981 GSTTP1A0A1W2PQM5 241 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 LINC01565O15544 149 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 ATP9AO75110 1047 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 STAG3L1P0CL83 205 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 CD52P31358 61 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 GTF2F1P35269 517 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 GNAQP50148 359 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 IGBP1P78318 339 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 MTMR1Q13613 665 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 MARCH8Q5T0T0 291 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 FAM49AQ9H0Q0 323 aaPredicted RBP16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 AZI2Q9H6S1 392 aa16.28■□□□□ 0.2
CHMP1A-210ENST00000551981 SPDYE3A6NKU9 549 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 MAFGO15525 162 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 ITGB5P18084 799 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 ANTXR2P58335 489 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 PTH1RQ03431 593 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 PAK2Q13177 524 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 TTC22Q5TAA0 569 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 CASC1Q6TDU7 716 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 EFHBQ8N7U6 833 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 EDAQ92838 391 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 AGO3Q9H9G7 860 aaKnown RBP16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 PKD2L1Q9P0L9 805 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 TRPV2Q9Y5S1 764 aa16.27■□□□□ 0.2
CHMP1A-210ENST00000551981 LOXHD1Q8IVV2 1947 aa16.27■□□□□ 0.19
CHMP1A-210ENST00000551981 EYA4O95677 639 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 ITGB1P05556 798 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 INSRRP14616 1297 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 CAMK1Q14012 370 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 PKN1Q16512 942 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 MB21D2Q8IYB1 491 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 SPPL3Q8TCT6 385 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 LINC01599Q8WXQ3 324 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 MSLNLQ96KJ4 702 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 MYL10Q9BUA6 226 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 LY9Q9HBG7 655 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 LRFN2Q9ULH4 789 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 UBIAD1Q9Y5Z9 338 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 TAF6LQ9Y6J9 622 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 TECTAO75443 2155 aa16.26■□□□□ 0.19
CHMP1A-210ENST00000551981 SCG2P13521 617 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 DNAJB1P25685 340 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 CHMLP26374 656 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 NRIP1P48552 1158 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 COASYQ13057 564 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 PAN2Q504Q3 1202 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 NFXL1Q6ZNB6 911 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 FAM43BQ6ZT52 329 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 TMTC2Q8N394 836 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 KLHL23Q8NBE8 558 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 SMRP1Q8NCR6 262 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 POF1BQ8WVV4 589 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 JADE2Q9NQC1 790 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 PADI3Q9ULW8 664 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 PCDHA2Q9Y5H9 948 aa16.25■□□□□ 0.19
CHMP1A-210ENST00000551981 IGSF9BQ9UPX0 1349 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms