RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 HDAC6Q9UBN7 1215 aa21.02■□□□□ 0.96
DDX54-209ENST00000551912 GTF2IRD1Q9UHL9 959 aa21.02■□□□□ 0.96
DDX54-209ENST00000551912 NR2E3Q9Y5X4 410 aa21.02■□□□□ 0.96
DDX54-209ENST00000551912 LAD1O00515 517 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 B4GALT4O60513 344 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 CLTBP09497 229 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 SMIM10L2AP0DMW4 78 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 SMIM10L2BP0DMW5 78 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 SPIRE1Q08AE8 756 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 PTGDRQ13258 359 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 NCAPH2Q6IBW4 605 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 PDXDC2PQ6P474 469 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 C4orf32Q8N8J7 132 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 TRPV6Q9H1D0 765 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 GABBR1Q9UBS5 961 aa21.01■□□□□ 0.95
DDX54-209ENST00000551912 MAFBQ9Y5Q3 323 aaPredicted RBP21.01■□□□□ 0.95
DDX54-209ENST00000551912 EML1O00423 815 aa21■□□□□ 0.95
DDX54-209ENST00000551912 CD4P01730 458 aa21■□□□□ 0.95
DDX54-209ENST00000551912 ZSCAN22P10073 491 aaPredicted RBP21■□□□□ 0.95
DDX54-209ENST00000551912 ANP32AP39687 249 aaKnown RBP21■□□□□ 0.95
DDX54-209ENST00000551912 FAAP100Q0VG06 881 aa21■□□□□ 0.95
DDX54-209ENST00000551912 TNPO1Q92973 898 aaKnown RBP21■□□□□ 0.95
DDX54-209ENST00000551912 TRMT13Q9NUP7 481 aaKnown RBP21■□□□□ 0.95
DDX54-209ENST00000551912 IGSF9BQ9UPX0 1349 aa21■□□□□ 0.95
DDX54-209ENST00000551912 PDE4DIPQ5VU43 2346 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 C17orf102A2RUQ5 167 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 PLCB4Q15147 1175 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 GDF6Q6KF10 455 aaPredicted RBP20.99■□□□□ 0.95
DDX54-209ENST00000551912 CKAP2LQ8IYA6 745 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 ATP6V0A1Q93050 837 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 PRDM5Q9NQX1 630 aaPredicted RBP20.99■□□□□ 0.95
DDX54-209ENST00000551912 PDLIM7Q9NR12 457 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 TMEM39AQ9NV64 488 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 PRKAG2Q9UGJ0 569 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 TRPC6Q9Y210 931 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 NOD1Q9Y239 953 aa20.99■□□□□ 0.95
DDX54-209ENST00000551912 POTEB3A0JP26 581 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 GNAT1P11488 350 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 TECP42680 631 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 PPFIA1Q13136 1202 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 PKP1Q13835 747 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 EPHA7Q15375 998 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 PTGISQ16647 500 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 TMEM266Q2M3C6 531 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 FOXD4L5Q5VV16 416 aaPredicted RBP20.98■□□□□ 0.95
DDX54-209ENST00000551912 FAM173BQ6P4H8 233 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 POTEBQ6S5H4 581 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 ATP8B4Q8TF62 1192 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 FOXD4L4Q8WXT5 416 aaPredicted RBP20.98■□□□□ 0.95
DDX54-209ENST00000551912 SETD4Q9NVD3 440 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 CEP131Q9UPN4 1083 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 NRCAMQ92823 1304 aa20.98■□□□□ 0.95
DDX54-209ENST00000551912 MYH9P35579 1960 aaKnown RBP20.97■□□□□ 0.95
DDX54-209ENST00000551912 POTEMA6NI47 508 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 HBP1O60381 514 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 BMP15O95972 392 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 F13A1P00488 732 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 ATP4AP20648 1035 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 HOXC8P31273 242 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 PRPHP41219 470 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 ATP2C1P98194 919 aaPredicted RBP20.97■□□□□ 0.95
DDX54-209ENST00000551912 UGCGQ16739 394 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 BANK1Q8NDB2 785 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 FAM167AQ96KS9 214 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 TBX21Q9UL17 535 aa20.97■□□□□ 0.95
DDX54-209ENST00000551912 DKC1O60832 514 aaKnown RBP eCLIP20.96■□□□□ 0.95
DDX54-209ENST00000551912 P4HBP07237 508 aaKnown RBP20.96■□□□□ 0.95
DDX54-209ENST00000551912 INSRRP14616 1297 aa20.96■□□□□ 0.95
DDX54-209ENST00000551912 QARSP47897 775 aaKnown RBP20.96■□□□□ 0.95
DDX54-209ENST00000551912 FXR2P51116 673 aaKnown RBP eCLIP20.96■□□□□ 0.951e-7■■■■■ 29.9
DDX54-209ENST00000551912 PSMC5P62195 406 aa20.96■□□□□ 0.95
DDX54-209ENST00000551912 ZNF200P98182 395 aaPredicted RBP20.96■□□□□ 0.95
DDX54-209ENST00000551912 PRKCEQ02156 737 aa20.96■□□□□ 0.95
DDX54-209ENST00000551912 HIC1Q14526 733 aa20.96■□□□□ 0.95
DDX54-209ENST00000551912 SF3A1Q15459 793 aaKnown RBP20.96■□□□□ 0.95
DDX54-209ENST00000551912 GRIK4Q16099 956 aa20.96■□□□□ 0.95
DDX54-209ENST00000551912 DTHD1Q6ZMT9 781 aa20.96■□□□□ 0.95
DDX54-209ENST00000551912 SH3RF1Q7Z6J0 888 aa20.96■□□□□ 0.95
DDX54-209ENST00000551912 LMBR1Q8WVP7 490 aa20.96■□□□□ 0.95
DDX54-209ENST00000551912 BBXQ8WY36 941 aaPredicted RBP20.96■□□□□ 0.95
DDX54-209ENST00000551912 DAXXQ9UER7 740 aaPredicted RBP20.96■□□□□ 0.95
DDX54-209ENST00000551912 ZMYND8Q9ULU4 1186 aaPredicted RBP20.96■□□□□ 0.95
DDX54-209ENST00000551912 KAT6AQ92794 2004 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 TRIM43BA6NCK2 446 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 RRN3P2A6NIE6 340 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 KIAA0355O15063 1070 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 ZNF862O60290 1169 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 OATP04181 439 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 CYP2C9P11712 490 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 SYN1P17600 705 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 TRMT1LQ7Z2T5 733 aaKnown RBP20.95■□□□□ 0.94
DDX54-209ENST00000551912 NEK9Q8TD19 979 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 TRIM43Q96BQ3 446 aaPredicted RBP20.95■□□□□ 0.94
DDX54-209ENST00000551912 EIF2AK1Q9BQI3 630 aaKnown RBP20.95■□□□□ 0.94
DDX54-209ENST00000551912 RAB34Q9BZG1 259 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 NRBP2Q9NSY0 501 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 CLIC4Q9Y696 253 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 WDR81Q562E7 1941 aa20.95■□□□□ 0.94
DDX54-209ENST00000551912 BRD1O95696 1058 aa20.94■□□□□ 0.94
DDX54-209ENST00000551912 IGBP1P78318 339 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms