RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 ADCY6O43306 1168 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 MYCLP12524 364 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-216ENST00000550869 FOSL2P15408 326 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 TNFAIP2Q03169 654 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 RESP18Q5W5W9 173 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 PSRC1Q6PGN9 363 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-216ENST00000550869 FAM126BQ8IXS8 530 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 ENGASEQ8NFI3 743 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 GPT2Q8TD30 523 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 VTI1AQ96AJ9 217 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 ZFP91Q96JP5 570 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-216ENST00000550869 AK8Q96MA6 479 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 RIT2Q99578 217 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 TTC12Q9H892 705 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-216ENST00000550869 AGO4Q9HCK5 861 aaKnown RBP13.63□□□□□ -0.23
ERBB3-216ENST00000550869 VAV3Q9UKW4 847 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 CHD9Q3L8U1 2897 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 MUC3AQ02505 3323 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 VWA3AA6NCI4 1184 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 CTAGE5O15320 804 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 DNAJB2P25686 324 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 TXKP42681 527 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 SNW1Q13573 536 aaKnown RBP13.62□□□□□ -0.23
ERBB3-216ENST00000550869 MTMR1Q13613 665 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 NLRX1Q86UT6 975 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 MYLIPQ8WY64 445 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 CDHR1Q96JP9 859 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 MPHOSPH6Q99547 160 aaKnown RBP13.62□□□□□ -0.23
ERBB3-216ENST00000550869 SENP7Q9BQF6 1050 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 GNEQ9Y223 722 aaKnown RBP13.62□□□□□ -0.23
ERBB3-216ENST00000550869 Q9Y3F1 56 aa13.62□□□□□ -0.23
ERBB3-216ENST00000550869 DDX49Q9Y6V7 483 aaKnown RBP13.62□□□□□ -0.23
ERBB3-216ENST00000550869 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
ERBB3-216ENST00000550869 IPO5O00410 1097 aaKnown RBP13.61□□□□□ -0.23
ERBB3-216ENST00000550869 ZEB2O60315 1214 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 ATP9AO75110 1047 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 MBD3O95983 291 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 CD4P01730 458 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 TGFB3P10600 412 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 KCNA2P16389 499 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 TECP42680 631 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 PDE4DQ08499 809 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 ITGB3BPQ13352 177 aaPredicted RBP13.61□□□□□ -0.23
ERBB3-216ENST00000550869 PPP2R5CQ13362 524 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 FSCN1Q16658 493 aaKnown RBP13.61□□□□□ -0.23
ERBB3-216ENST00000550869 GNPTABQ3T906 1256 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 IQSEC1Q6DN90 963 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 USP49Q70CQ1 688 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 TLK2Q86UE8 772 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 SLC43A3Q8NBI5 491 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 MRPS27Q92552 414 aaKnown RBP13.61□□□□□ -0.23
ERBB3-216ENST00000550869 GJA10Q969M2 543 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.235e-7■■■□□ 16.1
ERBB3-216ENST00000550869 ZNF577Q9BSK1 485 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 MMTAG2Q9BU76 263 aaKnown RBP13.61□□□□□ -0.23
ERBB3-216ENST00000550869 AP5M1Q9H0R1 490 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 GOLPH3LQ9H4A5 285 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 VTA1Q9NP79 307 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 NFASCO94856 1347 aa13.61□□□□□ -0.23
ERBB3-216ENST00000550869 GOLGA6L4A6NEF3 574 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 SLC26A4O43511 780 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 LIG1P18858 919 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 KLHL40Q2TBA0 621 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 SKOR2Q2VWA4 1001 aaPredicted RBP13.6□□□□□ -0.23
ERBB3-216ENST00000550869 SPECC1Q5M775 1068 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 TMEM240Q5SV17 173 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 TAPT1Q6NXT6 567 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 CCDC62Q6P9F0 684 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
ERBB3-216ENST00000550869 FSIP1Q8NA03 581 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 SYMPKQ92797 1274 aaKnown RBP13.6□□□□□ -0.23
ERBB3-216ENST00000550869 TIFAQ96CG3 184 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 EPSTI1Q96J88 318 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 MTIF3Q9H2K0 278 aaKnown RBP13.6□□□□□ -0.23
ERBB3-216ENST00000550869 TBC1D22BQ9NU19 505 aa13.6□□□□□ -0.23
ERBB3-216ENST00000550869 A0A1B0GVL5 298 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.59□□□□□ -0.23
ERBB3-216ENST00000550869 TRAK2O60296 914 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 CSF2RAP15509 400 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 PFKFB1P16118 471 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 NDUFA8P51970 172 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 IRX5P78411 483 aaPredicted RBP13.59□□□□□ -0.23
ERBB3-216ENST00000550869 SP2Q02086 613 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 FAM160A1Q05DH4 1040 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 TMEM266Q2M3C6 531 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 HYIQ5T013 277 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 LRCH2Q5VUJ6 765 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 RAB34Q9BZG1 259 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 ZNF576Q9H609 170 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 IL23AQ9NPF7 189 aa13.59□□□□□ -0.23
ERBB3-216ENST00000550869 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
ERBB3-216ENST00000550869 WDR81Q562E7 1941 aa13.58□□□□□ -0.23
ERBB3-216ENST00000550869 A0A087X0B3 334 aa13.58□□□□□ -0.24
ERBB3-216ENST00000550869 POTEMA6NI47 508 aa13.58□□□□□ -0.24
ERBB3-216ENST00000550869 PP2D1A8MPX8 630 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms