RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 KDM2BQ8NHM5 1336 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 LTBP3Q9NS15 1303 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 SNED1Q8TER0 1413 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 LRRN2O75325 713 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 SASH1O94885 1247 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 IGHDP01880 384 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 FANCCQ00597 558 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 NUCB1Q02818 461 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 APOBRQ0VD83 1088 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 TFCP2Q12800 502 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 UBE4AQ14139 1066 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 LRRC24Q50LG9 513 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 DPP8Q6V1X1 898 aaPredicted RBP7.01□□□□□ -1.29
SCAF11-213ENST00000550629 CLASRPQ8N2M8 674 aaKnown RBP7.01□□□□□ -1.29
SCAF11-213ENST00000550629 DTWD2Q8NBA8 298 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 RNF141Q8WVD5 230 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 LPIN2Q92539 896 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 KREMEN1Q96MU8 473 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 PUS3Q9BZE2 481 aaKnown RBP7.01□□□□□ -1.29
SCAF11-213ENST00000550629 EHMT1Q9H9B1 1298 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 LTBP1Q14766 1721 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 ZNF804BA4D1E1 1349 aa7.01□□□□□ -1.29
SCAF11-213ENST00000550629 MED23Q9ULK4 1368 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 SLX4Q8IY92 1834 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 IFIT1P09914 478 aaKnown RBP7□□□□□ -1.29
SCAF11-213ENST00000550629 FGFR2P21802 821 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 KCNJ4P48050 445 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 GPSM2P81274 684 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 CLCQ05315 142 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 MLANAQ16655 118 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 ATP2B3Q16720 1220 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 ARSHQ5FYA8 562 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 GK5Q6ZS86 529 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 TBC1D16Q8TBP0 767 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
SCAF11-213ENST00000550629 EYA3Q99504 573 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 SPON2Q9BUD6 331 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 NT5C1AQ9BXI3 368 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 CTNND2Q9UQB3 1225 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 ZNF609O15014 1411 aa7□□□□□ -1.29
SCAF11-213ENST00000550629 DUOX1Q9NRD9 1551 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 ARFGEF1Q9Y6D6 1849 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 RGS13O14921 159 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 UFL1O94874 794 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 RECKO95980 971 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 ESR1P03372 595 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 SRFP11831 508 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 SLC5A1P13866 664 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 TPP2P29144 1249 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-213ENST00000550629 GBP1P32455 592 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 MCM4P33991 863 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 ZNF394Q53GI3 561 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 TNNI3KQ59H18 835 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 USP48Q86UV5 1035 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 CHD1LQ86WJ1 897 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 KIAA0825Q8IV33 1275 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 SLITRK4Q8IW52 837 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 REXO1Q8N1G1 1221 aaKnown RBP6.99□□□□□ -1.29
SCAF11-213ENST00000550629 BHLHE22Q8NFJ8 381 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-213ENST00000550629 NKD1Q969G9 470 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 ZNF512BQ96KM6 892 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-213ENST00000550629 GPR62Q9BZJ7 368 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 TAOK3Q9H2K8 898 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 METTL5Q9NRN9 209 aaKnown RBP6.99□□□□□ -1.29
SCAF11-213ENST00000550629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.99□□□□□ -1.292e-7■□□□□ 11.1
SCAF11-213ENST00000550629 GMIPQ9P107 970 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 KCNH3Q9ULD8 1083 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 FPGT-TNNI3KV9GXZ4 949 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 IRS2Q9Y4H2 1338 aa6.99□□□□□ -1.29
SCAF11-213ENST00000550629 A0A1B0GUL7 405 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 TAF5LO75529 589 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 UBOX5O94941 541 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 IFIT2P09913 472 aaKnown RBP6.98□□□□□ -1.29
SCAF11-213ENST00000550629 RAG1P15918 1043 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 KIAA2012Q0VF49 1180 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 MESP2Q0VG99 397 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 CAVIN4Q5BKX8 364 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 ANKRD45Q5TZF3 282 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 OVOS1Q6IE37 1185 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 TMPRSS7Q7RTY8 843 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 ZNF804AQ7Z570 1209 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 AACSQ86V21 672 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 RNF34Q969K3 372 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 EAF2Q96CJ1 260 aaPredicted RBP6.98□□□□□ -1.29
SCAF11-213ENST00000550629 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 GPATCH3Q96I76 525 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 TRIT1Q9H3H1 467 aaKnown RBP6.98□□□□□ -1.29
SCAF11-213ENST00000550629 GNL3LQ9NVN8 582 aaKnown RBP6.98□□□□□ -1.29
SCAF11-213ENST00000550629 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 POLLQ9UGP5 575 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 PCDHGB7Q9Y5F8 929 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 SPEF2Q9C093 1822 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 ARAP2Q8WZ64 1704 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 AOX1Q06278 1338 aa6.98□□□□□ -1.29
SCAF11-213ENST00000550629 PDS5AQ29RF7 1337 aaKnown RBP6.98□□□□□ -1.29
SCAF11-213ENST00000550629 A0A1B0GUL6 1792 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 IGSF3O75054 1194 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 UQCRFS1P1P0C7P4 283 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 TAF1P21675 1872 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 VAMP1P23763 118 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms