RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 MAB21L3Q8N8X9 362 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 CCHCR1Q8TD31 782 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.2□□□□□ -0.3
VDR-208ENST00000550325 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 RIC1Q4ADV7 1423 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 SSU72P8A0A1W2PR75 194 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 C5orf60A6NFR6 353 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 SNUPNO95149 360 aaKnown RBP13.19□□□□□ -0.3
VDR-208ENST00000550325 CSF1RP07333 972 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 KRT16P08779 473 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 CYP2D6P10635 497 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 NAPAP54920 295 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 EBF2Q9HAK2 575 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 ETAA1Q9NY74 926 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 LMTK3Q96Q04 1460 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 TCP11X1B4DZS4 312 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 HIP1RO75146 1068 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 NEFHP12036 1026 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 FGFR4P22455 802 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 ANKRD20A2Q5SQ80 823 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 ANKRD20A1Q5TYW2 823 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 ANKRD20A3Q5VUR7 823 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 ECM29Q5VYK3 1845 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 CFAP73A6NFT4 308 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 LGR5O75473 907 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
VDR-208ENST00000550325 CEP72Q9P209 647 aa13.19□□□□□ -0.3
VDR-208ENST00000550325 MYMKA6NI61 221 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 PSMD2Q13200 908 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 SLC29A2Q14542 456 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 DCAF17Q5H9S7 520 aaPredicted RBP13.18□□□□□ -0.3
VDR-208ENST00000550325 NEK9Q8TD19 979 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
VDR-208ENST00000550325 PBKQ96KB5 322 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 SRRM3A6NNA2 597 aaPredicted RBP13.18□□□□□ -0.3
VDR-208ENST00000550325 IRF6O14896 467 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 DDAH1O94760 285 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 LCA5LO95447 670 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
VDR-208ENST00000550325 GNAT1P11488 350 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 GYG1P46976 350 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 PMS2P54278 862 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 ADCY2Q08462 1091 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 SLC30A9Q6PML9 568 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 IFT74Q96LB3 600 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 PCDHA6Q9UN73 950 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 PCDHA8Q9Y5H6 950 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 PTK2Q05397 1052 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 IFI16Q16666 785 aaKnown RBP13.18□□□□□ -0.3
VDR-208ENST00000550325 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
VDR-208ENST00000550325 SMNDC1O75940 238 aaKnown RBP eCLIP13.17□□□□□ -0.3
VDR-208ENST00000550325 MYL1P05976 194 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 CCND1P24385 295 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 RCAN1P53805 252 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 POLE2P56282 527 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 NCALDP61601 193 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 ALKBH5Q6P6C2 394 aaKnown RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 FBF1Q8TES7 1133 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 UBA5Q9GZZ9 404 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 FAM114A2Q9NRY5 505 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 BIN2Q9UBW5 565 aaPredicted RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 FOXO6A8MYZ6 492 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 USP11P51784 963 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 RNASELQ05823 741 aaKnown RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 ASTE1Q2TB18 679 aaPredicted RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 NLRP10Q86W26 655 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 SLAIN2Q9P270 581 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 PTPN22Q9Y2R2 807 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 DAAM1Q9Y4D1 1078 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 PCDHGC5Q9Y5F6 944 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 MEGF6O75095 1541 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 BCL9LQ86UU0 1499 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 LRRD1A4D1F6 860 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 POTEMA6NI47 508 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 SUN1O94901 812 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 MSH2P43246 934 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 RWDD2BP57060 319 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 DR1Q01658 176 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 CENPPQ6IPU0 288 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 C1orf131Q8NDD1 294 aaKnown RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 ETNK1Q9HBU6 452 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 ZFATQ9P243 1243 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
VDR-208ENST00000550325 SLC12A4Q9UP95 1085 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 NR2E1Q9Y466 385 aa13.17□□□□□ -0.3
VDR-208ENST00000550325 NFAT5O94916 1531 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 LONP2Q86WA8 852 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 MYOCDQ8IZQ8 938 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 VGLL2Q8N8G2 317 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 INHBEP58166 350 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms