RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 MFSD5Q6N075 450 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 NEK8Q86SG6 692 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 C7orf31Q8N865 590 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 GIMAP8Q8ND71 665 aaPredicted RBP12.71□□□□□ -0.37
RAB5B-208ENST00000550283 LMBR1Q8WVP7 490 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 SDF4Q9BRK5 362 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 UBE2OQ9C0C9 1292 aaKnown RBP12.71□□□□□ -0.37
RAB5B-208ENST00000550283 TMEM60Q9H2L4 133 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 DDX25Q9UHL0 483 aaKnown RBP12.71□□□□□ -0.37
RAB5B-208ENST00000550283 VAV3Q9UKW4 847 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 TMEM150BA6NC51 233 aa12.7□□□□□ -0.38
RAB5B-208ENST00000550283 ZBTB42B2RXF5 422 aa12.7□□□□□ -0.38
RAB5B-208ENST00000550283 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
RAB5B-208ENST00000550283 CHMP2AO43633 222 aa12.7□□□□□ -0.38
RAB5B-208ENST00000550283 CCNT1O60563 726 aaKnown RBP12.7□□□□□ -0.38
RAB5B-208ENST00000550283 XBP1P17861 261 aa12.7□□□□□ -0.38
RAB5B-208ENST00000550283 TOB1P50616 345 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-208ENST00000550283 SETQ01105 290 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-208ENST00000550283 PTPN11Q06124 597 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-208ENST00000550283 FAM109BQ6ICB4 259 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-208ENST00000550283 SWSAP1Q6NVH7 229 aa12.7□□□□□ -0.38
RAB5B-208ENST00000550283 LRCH3Q96II8 777 aa12.7□□□□□ -0.38
RAB5B-208ENST00000550283 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.388e-8■■■□□ 15.3
RAB5B-208ENST00000550283 WRAP73Q9P2S5 460 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-208ENST00000550283 PRKAG2Q9UGJ0 569 aa12.7□□□□□ -0.38
RAB5B-208ENST00000550283 STBD1O95210 358 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 INSRRP14616 1297 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 ATP2B1P20020 1258 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 HMGN5P82970 282 aaKnown RBP12.69□□□□□ -0.38
RAB5B-208ENST00000550283 FPGSQ05932 587 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 SPIRE1Q08AE8 756 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 TMEM240Q5SV17 173 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 LRCH2Q5VUJ6 765 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 PPP4R3AQ6IN85 833 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 MOXD1Q6UVY6 613 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 TRMT1LQ7Z2T5 733 aaKnown RBP12.69□□□□□ -0.38
RAB5B-208ENST00000550283 SERINC5Q86VE9 423 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 GLG1Q92896 1179 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 LBHD1Q9BQE6 289 aaPredicted RBP12.69□□□□□ -0.38
RAB5B-208ENST00000550283 KATNAL1Q9BW62 490 aa12.69□□□□□ -0.38
RAB5B-208ENST00000550283 CXXC1Q9P0U4 656 aaPredicted RBP12.69□□□□□ -0.38
RAB5B-208ENST00000550283 C17orf102A2RUQ5 167 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 GAS7O60861 476 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 IQCF3P0C7M6 154 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 CKBP12277 381 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 STAT5BP51692 787 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 IGBP1P78318 339 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 GRIK4Q16099 956 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 ZNF618Q5T7W0 954 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 ZNF746Q6NUN9 644 aaPredicted RBP12.68□□□□□ -0.38
RAB5B-208ENST00000550283 ZNF365Q70YC5 407 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 FAM184AQ8NB25 1140 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 ATP6V0A1Q93050 837 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 RIT2Q99578 217 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 SH2D3AQ9BRG2 576 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 SMARCAD1Q9H4L7 1026 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 TBC1D22BQ9NU19 505 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 ERAP1Q9NZ08 941 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 GABBR1Q9UBS5 961 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 TET1Q8NFU7 2136 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 TANC1Q9C0D5 1861 aa12.68□□□□□ -0.38
RAB5B-208ENST00000550283 IGSF9BQ9UPX0 1349 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 BACH1O14867 736 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 NBNO60934 754 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 U2AF2P26368 475 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAB5B-208ENST00000550283 MCM2P49736 904 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 RBL2Q08999 1139 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 PPFIA1Q13136 1202 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 PTK7Q13308 1070 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 TRIM29Q14134 588 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 ZNF174Q15697 407 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 PLPPR4Q7Z2D5 763 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 DEFB128Q7Z7B8 93 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 TDHQ8IZJ6 230 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 C4orf32Q8N8J7 132 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 AFAP1L1Q8TED9 768 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 MTMR9Q96QG7 549 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 TEKT3Q9BXF9 490 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
RAB5B-208ENST00000550283 ZNF302Q9NR11 478 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 ZNF215Q9UL58 517 aaPredicted RBP12.67□□□□□ -0.38
RAB5B-208ENST00000550283 MAFBQ9Y5Q3 323 aaPredicted RBP12.67□□□□□ -0.38
RAB5B-208ENST00000550283 COL6A3P12111 3177 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 SIP14410 1827 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
RAB5B-208ENST00000550283 A0A087WWV3 80 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 MBLAC1A4D2B0 266 aaPredicted RBP12.66□□□□□ -0.38
RAB5B-208ENST00000550283 GRXCR1A8MXD5 290 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 ZBTB39O15060 712 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 CTSHP09668 335 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 MCM7P33993 719 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 KRT76Q01546 638 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 PDXDC2PQ6P474 469 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 NOSTRINQ8IVI9 506 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
RAB5B-208ENST00000550283 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms