RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 DDX41Q9UJV9 622 aaKnown RBP13.53□□□□□ -0.24
CACNB3-213ENST00000550064 DIS3Q9Y2L1 958 aaKnown RBP13.53□□□□□ -0.24
CACNB3-213ENST00000550064 PCDHA10Q9Y5I2 948 aa13.53□□□□□ -0.24
CACNB3-213ENST00000550064 NPHP3-ACAD11A0A0J9YXS1 232 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 RHOBTB3O94955 611 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 ARIH2O95376 493 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 ALDH1A1P00352 501 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 TGFB3P10600 412 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 QARSP47897 775 aaKnown RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 ACTR2P61160 394 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 SP4Q02446 784 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 NEDD9Q14511 834 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 ARSHQ5FYA8 562 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 ZNF658Q5TYW1 1059 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 KCNV1Q6PIU1 500 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 MAMDC4Q6UXC1 1216 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 DHX40Q8IX18 779 aaKnown RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 SMAP1Q8IYB5 467 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 SMYD4Q8IYR2 804 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 AOPEPQ8N6M6 819 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 GIMAP8Q8ND71 665 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 NPLOC4Q8TAT6 608 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 DNAJC19Q96DA6 116 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 MAML3Q96JK9 1138 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 BHMT2Q9H2M3 363 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 BMP2KQ9NSY1 1161 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-213ENST00000550064 DACH1Q9UI36 760 aa13.52□□□□□ -0.25
CACNB3-213ENST00000550064 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 LYPLA2O95372 231 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-213ENST00000550064 PSAPP07602 524 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 PSMC5P62195 406 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 MAP2K5Q13163 448 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 UGCGQ16739 394 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 LY6KQ17RY6 165 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 MIS18BP1Q6P0N0 1132 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 CCDC62Q6P9F0 684 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 ABHD15Q6UXT9 468 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 UNC13DQ70J99 1090 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-213ENST00000550064 VTA1Q9NP79 307 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 PDGFCQ9NRA1 345 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 EXOC1Q9NV70 894 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-213ENST00000550064 SLC5A4Q9NY91 659 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 GDAQ9Y2T3 454 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 LOXHD1Q8IVV2 1947 aa13.51□□□□□ -0.25
CACNB3-213ENST00000550064 SYNGAP1Q96PV0 1343 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 GSTTP1A0A1W2PQM5 241 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 BECN2A8MW95 431 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 FARP2O94887 1054 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-213ENST00000550064 ATG7O95352 703 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 GGPS1O95749 300 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 KRT18P05783 430 aaKnown RBP13.5□□□□□ -0.25
CACNB3-213ENST00000550064 SUPT20HL2P0C7V6 817 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 IDEP14735 1019 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 CT47A1Q5JQC4 288 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-213ENST00000550064 CELF3Q5SZQ8 465 aaKnown RBP13.5□□□□□ -0.25
CACNB3-213ENST00000550064 RINT1Q6NUQ1 792 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 SWSAP1Q6NVH7 229 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 TAPT1Q6NXT6 567 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 C4orf19Q8IY42 314 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 SCFD2Q8WU76 684 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 USP6NLQ92738 828 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 HPS3Q969F9 1004 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 TINF2Q9BSI4 451 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 RUSC1Q9BVN2 902 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 KATNBL1Q9H079 304 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 GABBR1Q9UBS5 961 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 DBR1Q9UK59 544 aaKnown RBP13.5□□□□□ -0.25
CACNB3-213ENST00000550064 MGAMO43451 1857 aa13.5□□□□□ -0.25
CACNB3-213ENST00000550064 RBM47A0AV96 593 aaKnown RBP13.49□□□□□ -0.25
CACNB3-213ENST00000550064 SMTNL1A8MU46 457 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 GOLGA6L19H0YKK7 550 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 TNPO2O14787 897 aaKnown RBP13.49□□□□□ -0.25
CACNB3-213ENST00000550064 IKBKBO14920 756 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 HOXC6P09630 235 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 TXNP10599 105 aaKnown RBP13.49□□□□□ -0.25
CACNB3-213ENST00000550064 ERCC5P28715 1186 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-213ENST00000550064 CTGFP29279 349 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
CACNB3-213ENST00000550064 PRCPP42785 496 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-213ENST00000550064 EHHADHQ08426 723 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 RAD51AP2Q09MP3 1159 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 STK4Q13043 487 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 GIT2Q14161 759 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 TTLL4Q14679 1199 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 NCAPHQ15003 741 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 TMEM63BQ5T3F8 832 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 METTL7BQ6UX53 244 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 C1orf186Q6ZWK4 172 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 CCDC60Q8IWA6 550 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-213ENST00000550064 CCDC65Q8IXS2 484 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 ADSSL1Q8N142 457 aa13.49□□□□□ -0.25
CACNB3-213ENST00000550064 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms