RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 MARK3P27448 753 aa27.47■■□□□ 1.99
USP44-205ENST00000549639 DEFB103AP81534 67 aa27.47■■□□□ 1.99
USP44-205ENST00000549639 ITGB3BPQ13352 177 aaPredicted RBP27.47■■□□□ 1.99
USP44-205ENST00000549639 TCTN1Q2MV58 587 aa27.47■■□□□ 1.99
USP44-205ENST00000549639 CPLX2Q6PUV4 134 aaKnown RBP27.47■■□□□ 1.99
USP44-205ENST00000549639 PLA2G4DQ86XP0 818 aa27.47■■□□□ 1.99
USP44-205ENST00000549639 FAM177A1Q8N128 213 aaPredicted RBP27.47■■□□□ 1.99
USP44-205ENST00000549639 PCYT2Q99447 389 aa27.47■■□□□ 1.99
USP44-205ENST00000549639 FAM86B1E9PN63 330 aa27.46■■□□□ 1.99
USP44-205ENST00000549639 CPLX1O14810 134 aa27.46■■□□□ 1.99
USP44-205ENST00000549639 CTSHP09668 335 aa27.46■■□□□ 1.99
USP44-205ENST00000549639 FAM86B2P0C5J1 330 aa27.46■■□□□ 1.99
USP44-205ENST00000549639 STAT5BP51692 787 aa27.46■■□□□ 1.99
USP44-205ENST00000549639 TAP1Q03518 808 aa27.46■■□□□ 1.99
USP44-205ENST00000549639 NCOA5Q9HCD5 579 aaKnown RBP27.46■■□□□ 1.99
USP44-205ENST00000549639 TBC1D22BQ9NU19 505 aa27.46■■□□□ 1.99
USP44-205ENST00000549639 PRUNE2Q8WUY3 3088 aa27.46■■□□□ 1.99
USP44-205ENST00000549639 IGLV3-22A0A075B6J6 115 aa27.45■■□□□ 1.98
USP44-205ENST00000549639 POU3F3P20264 500 aaPredicted RBP27.45■■□□□ 1.98
USP44-205ENST00000549639 SSRP1Q08945 709 aaKnown RBP27.45■■□□□ 1.98
USP44-205ENST00000549639 MKRN4PQ13434 485 aaPredicted RBP27.45■■□□□ 1.98
USP44-205ENST00000549639 PDRG1Q9NUG6 133 aa27.45■■□□□ 1.98
USP44-205ENST00000549639 PTPRSQ13332 1948 aa27.44■■□□□ 1.98
USP44-205ENST00000549639 IGKV6D-21A0A0A0MT36 114 aa27.44■■□□□ 1.98
USP44-205ENST00000549639 IPO5O00410 1097 aaKnown RBP27.44■■□□□ 1.98
USP44-205ENST00000549639 INSRRP14616 1297 aa27.44■■□□□ 1.98
USP44-205ENST00000549639 MARCH8Q5T0T0 291 aa27.44■■□□□ 1.98
USP44-205ENST00000549639 FAM160B1Q5W0V3 765 aa27.44■■□□□ 1.98
USP44-205ENST00000549639 C22orf23Q9BZE7 217 aa27.44■■□□□ 1.98
USP44-205ENST00000549639 UPF3BQ9BZI7 483 aaKnown RBP27.44■■□□□ 1.98
USP44-205ENST00000549639 TRPC6Q9Y210 931 aa27.44■■□□□ 1.98
USP44-205ENST00000549639 DEXIO95424 95 aa27.43■■□□□ 1.98
USP44-205ENST00000549639 CIITAP33076 1130 aa27.43■■□□□ 1.98
USP44-205ENST00000549639 ANAPC15P60006 121 aa27.43■■□□□ 1.98
USP44-205ENST00000549639 USP38Q8NB14 1042 aa27.43■■□□□ 1.98
USP44-205ENST00000549639 ZNF577Q9BSK1 485 aa27.43■■□□□ 1.98
USP44-205ENST00000549639 INSL6Q9Y581 213 aa27.43■■□□□ 1.98
USP44-205ENST00000549639 DHX15O43143 795 aaKnown RBP27.42■■□□□ 1.98
USP44-205ENST00000549639 GTPBP6O43824 516 aaPredicted RBP27.42■■□□□ 1.98
USP44-205ENST00000549639 PLCB4Q15147 1175 aa27.42■■□□□ 1.98
USP44-205ENST00000549639 MIS18BP1Q6P0N0 1132 aa27.42■■□□□ 1.98
USP44-205ENST00000549639 ABHD15Q6UXT9 468 aa27.42■■□□□ 1.98
USP44-205ENST00000549639 RUFY4Q6ZNE9 571 aa27.42■■□□□ 1.98
USP44-205ENST00000549639 IFIH1Q9BYX4 1025 aaKnown RBP27.42■■□□□ 1.98
USP44-205ENST00000549639 VPS54Q9P1Q0 977 aa27.42■■□□□ 1.98
USP44-205ENST00000549639 TCEAL9Q9UHQ7 104 aa27.42■■□□□ 1.98
USP44-205ENST00000549639 CUL9Q8IWT3 2517 aa27.42■■□□□ 1.98
USP44-205ENST00000549639 MICAL3Q7RTP6 2002 aa27.41■■□□□ 1.98
USP44-205ENST00000549639 CHRNA1P02708 482 aa27.41■■□□□ 1.98
USP44-205ENST00000549639 CENPBP07199 599 aaPredicted RBP27.41■■□□□ 1.98
USP44-205ENST00000549639 USP11P51784 963 aa27.41■■□□□ 1.98
USP44-205ENST00000549639 NLRP5P59047 1200 aa27.41■■□□□ 1.98
USP44-205ENST00000549639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.41■■□□□ 1.98
USP44-205ENST00000549639 ARNTL2Q8WYA1 636 aa27.41■■□□□ 1.98
USP44-205ENST00000549639 TRANK1O15050 2925 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 POTEB3A0JP26 581 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 BACH1O14867 736 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 CCNE2O96020 404 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 IGBP1P78318 339 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 MGAT3Q09327 533 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 IER5Q5VY09 327 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 GALNT17Q6IS24 598 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 ZNF746Q6NUN9 644 aaPredicted RBP27.4■■□□□ 1.98
USP44-205ENST00000549639 POTEBQ6S5H4 581 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 TMCO2Q7Z6W1 182 aaPredicted RBP27.4■■□□□ 1.98
USP44-205ENST00000549639 SMAP1Q8IYB5 467 aaPredicted RBP27.4■■□□□ 1.98
USP44-205ENST00000549639 MYOCDQ8IZQ8 938 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 DNAJB3Q8WWF6 145 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 PPM1EQ8WY54 764 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 TSPYL2Q9H2G4 693 aaPredicted RBP27.4■■□□□ 1.98
USP44-205ENST00000549639 PCDHA2Q9Y5H9 948 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 SQORQ9Y6N5 450 aa27.4■■□□□ 1.98
USP44-205ENST00000549639 DDX39AO00148 427 aaKnown RBP27.39■■□□□ 1.98
USP44-205ENST00000549639 ADAMTS3O15072 1205 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 HBP1O60381 514 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 PPFIA3O75145 1194 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 CDKL5O76039 1030 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 HTRA4P83105 476 aaPredicted RBP27.39■■□□□ 1.98
USP44-205ENST00000549639 KRT76Q01546 638 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 PRR16Q569H4 304 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 SYMPKQ92797 1274 aaKnown RBP27.39■■□□□ 1.98
USP44-205ENST00000549639 TOP1MTQ969P6 601 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 TGS1Q96RS0 853 aaKnown RBP27.39■■□□□ 1.98
USP44-205ENST00000549639 CERS4Q9HA82 394 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 ZNF302Q9NR11 478 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 PCDHA4Q9UN74 947 aa27.39■■□□□ 1.98
USP44-205ENST00000549639 LCHNA4D1U4 455 aa27.38■■□□□ 1.97
USP44-205ENST00000549639 ARHGEF15O94989 841 aa27.38■■□□□ 1.97
USP44-205ENST00000549639 MRPS6P82932 125 aaKnown RBP27.38■■□□□ 1.97
USP44-205ENST00000549639 FAM43BQ6ZT52 329 aaPredicted RBP27.38■■□□□ 1.97
USP44-205ENST00000549639 NME8Q8N427 588 aa27.38■■□□□ 1.97
USP44-205ENST00000549639 RASGRP4Q8TDF6 673 aa27.38■■□□□ 1.97
USP44-205ENST00000549639 ATP8B4Q8TF62 1192 aa27.38■■□□□ 1.97
USP44-205ENST00000549639 ATXN2LQ8WWM7 1075 aaKnown RBP27.38■■□□□ 1.97
USP44-205ENST00000549639 COL1A2P08123 1366 aa27.37■■□□□ 1.97
USP44-205ENST00000549639 SMIM35A0A1B0GVV1 85 aa27.37■■□□□ 1.97
USP44-205ENST00000549639 M0QZ92 97 aa27.37■■□□□ 1.97
USP44-205ENST00000549639 ERVK-21P61565 698 aa27.37■■□□□ 1.97
USP44-205ENST00000549639 ANKRD1Q15327 319 aa27.37■■□□□ 1.97
USP44-205ENST00000549639 COL25A1Q9BXS0 654 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms