RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 SPINK2P20155 84 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 LPAL2Q16609 132 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 STPG1Q5TH74 334 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 C19orf48Q6RUI8 117 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 MRPL43Q8N983 215 aaKnown RBP12.47□□□□□ -0.41
TROAP-209ENST00000549275 KLHL5Q96PQ7 755 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
TROAP-209ENST00000549275 SCNM1Q9BWG6 230 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 FTHL17Q9BXU8 183 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 ATP8A2Q9NTI2 1148 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 CCPG1Q9ULG6 757 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 NEUROG3Q9Y4Z2 214 aa12.47□□□□□ -0.41
TROAP-209ENST00000549275 LAMA5O15230 3695 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 TMEM232C9JQI7 657 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 CLASP2O75122 1294 aaKnown RBP12.46□□□□□ -0.41
TROAP-209ENST00000549275 ZNF252P-AS1Q0IIN9 211 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 APOBRQ0VD83 1088 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 LY6KQ17RY6 165 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 COL28A1Q2UY09 1125 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 CHST3Q7LGC8 479 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 GPR149Q86SP6 731 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 C12orf50Q8NA57 414 aaPredicted RBP12.46□□□□□ -0.41
TROAP-209ENST00000549275 BCAS3Q9H6U6 928 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 CLIP2Q9UDT6 1046 aa12.46□□□□□ -0.41
TROAP-209ENST00000549275 MYH8P13535 1937 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 PTPDC1A2A3K4 754 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 TK2O00142 265 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 ARHGAP6O43182 974 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 ICAM1P05362 532 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 GHRP10912 638 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 NOVA1P51513 510 aaKnown RBP12.45□□□□□ -0.42
TROAP-209ENST00000549275 PRKCQQ04759 706 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 SMC1AQ14683 1233 aaKnown RBP12.45□□□□□ -0.42
TROAP-209ENST00000549275 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 RSPO2Q6UXX9 243 aaPredicted RBP12.45□□□□□ -0.42
TROAP-209ENST00000549275 FAM43BQ6ZT52 329 aaPredicted RBP12.45□□□□□ -0.42
TROAP-209ENST00000549275 TMC7Q7Z402 723 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 C12orf76Q8N812 135 aaPredicted RBP12.45□□□□□ -0.42
TROAP-209ENST00000549275 EPS15L1Q9UBC2 864 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 KIAA1671Q9BY89 1806 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 LCTP09848 1927 aa12.45□□□□□ -0.42
TROAP-209ENST00000549275 FRMPD2Q68DX3 1309 aaPredicted RBP12.44□□□□□ -0.42
TROAP-209ENST00000549275 NRCAMQ92823 1304 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 MAP3K13O43283 966 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 CHRNA1P02708 482 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 LAG3P18627 525 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 CALML3P27482 149 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 KRT17Q04695 432 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 BMS1Q14692 1282 aaKnown RBP12.44□□□□□ -0.42
TROAP-209ENST00000549275 LPIN1Q14693 890 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 LETM2Q2VYF4 491 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 SLFN13Q68D06 897 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 TSSK4Q6SA08 328 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 RNF207Q6ZRF8 634 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.44□□□□□ -0.42
TROAP-209ENST00000549275 COLGALT1Q8NBJ5 622 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 RSAD2Q8WXG1 361 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 DBNDD2Q9BQY9 259 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 MSRB2Q9Y3D2 182 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 RAI2Q9Y5P3 530 aa12.44□□□□□ -0.42
TROAP-209ENST00000549275 DENND4AQ7Z401 1863 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 C2orf71A6NGG8 1288 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 NCAM2O15394 837 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 NTRK1P04629 796 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 CNR2P34972 360 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 RPS9P46781 194 aaKnown RBP12.43□□□□□ -0.42
TROAP-209ENST00000549275 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
TROAP-209ENST00000549275 SIM2Q14190 667 aaPredicted RBP12.43□□□□□ -0.42
TROAP-209ENST00000549275 CCDC6Q16204 474 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 MAMSTRQ6ZN01 415 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 WDR63Q8IWG1 891 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 STAMQ92783 540 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 GLG1Q92896 1179 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 CLDN23Q96B33 292 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 GMCL1Q96IK5 515 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 NELL2Q99435 816 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 SFXN1Q9H9B4 322 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 DDX41Q9UJV9 622 aaKnown RBP12.43□□□□□ -0.42
TROAP-209ENST00000549275 PNMA2Q9UL42 364 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 LRFN2Q9ULH4 789 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 MYO18BQ8IUG5 2567 aa12.43□□□□□ -0.42
TROAP-209ENST00000549275 PATJQ8NI35 1801 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 FAM170BA6NMN3 283 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 NFIBO00712 420 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 PPM1AP35813 382 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 G3BP1Q13283 466 aaKnown RBP eCLIP12.42□□□□□ -0.42
TROAP-209ENST00000549275 MTX1Q13505 466 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 TMC5Q6UXY8 1006 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 SLC30A10Q6XR72 485 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 C15orf39Q6ZRI6 1047 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 SEPT14Q6ZU15 432 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 ZNF605Q86T29 641 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 CABP7Q86V35 215 aa12.42□□□□□ -0.42
TROAP-209ENST00000549275 LINC01599Q8WXQ3 324 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms