RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PSMD1Q99460 953 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 BMP2KQ9NSY1 1161 aaPredicted RBP25.27■■□□□ 1.64
NPAS3-206ENST00000548645 PANK4Q9NVE7 773 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 ESYT2A0FGR8 921 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 KLRK1P26718 216 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 FLT3P36888 993 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 PTK2Q05397 1052 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 METTL13Q8N6R0 699 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 CCT6BQ92526 530 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 DNAJC19Q96DA6 116 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 DNAJC8O75937 253 aaPredicted RBP25.26■■□□□ 1.63
NPAS3-206ENST00000548645 LMBR1Q8WVP7 490 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 HVCN1Q96D96 273 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 NUDT12Q9BQG2 462 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 FAM114A2Q9NRY5 505 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 TMEM260Q9NX78 707 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 MRPL12P52815 198 aaKnown RBP25.26■■□□□ 1.63
NPAS3-206ENST00000548645 NBPF9Q3BBW0 867 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 GOLPH3Q9H4A6 298 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 AMACRQ9UHK6 382 aa25.26■■□□□ 1.63
NPAS3-206ENST00000548645 BACH1O14867 736 aa25.25■■□□□ 1.63
NPAS3-206ENST00000548645 DRD4P21917 467 aa25.25■■□□□ 1.63
NPAS3-206ENST00000548645 DHX9Q08211 1270 aaKnown RBP25.25■■□□□ 1.63
NPAS3-206ENST00000548645 SPTY2D1Q68D10 685 aaPredicted RBP25.25■■□□□ 1.63
NPAS3-206ENST00000548645 PHF20L1A8MW92 1017 aa25.25■■□□□ 1.63
NPAS3-206ENST00000548645 SLC37A4O43826 429 aa25.25■■□□□ 1.63
NPAS3-206ENST00000548645 SMARCA1P28370 1054 aa25.25■■□□□ 1.63
NPAS3-206ENST00000548645 EIF3BP55884 814 aaKnown RBP25.25■■□□□ 1.63
NPAS3-206ENST00000548645 CHMP6Q96FZ7 201 aa25.25■■□□□ 1.63
NPAS3-206ENST00000548645 KANSL2Q9H9L4 492 aa25.25■■□□□ 1.63
NPAS3-206ENST00000548645 MYH4Q9Y623 1939 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 F8VZ95 297 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 C3orf67Q6ZVT6 689 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 ZNF571Q7Z3V5 609 aaPredicted RBP25.24■■□□□ 1.63
NPAS3-206ENST00000548645 PEX26Q7Z412 305 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 IRF2BP2Q7Z5L9 587 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 RASGEF1CQ8N431 466 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 PROCA1Q8NCQ7 364 aaPredicted RBP25.24■■□□□ 1.63
NPAS3-206ENST00000548645 SEC14L1Q92503 715 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 CENPTQ96BT3 561 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 VAT1LQ9HCJ6 419 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 TFCP2L1Q9NZI6 479 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 UTP11Q9Y3A2 253 aaKnown RBP25.24■■□□□ 1.63
NPAS3-206ENST00000548645 ATP2C2O75185 946 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 TPCN2Q8NHX9 752 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 SPAG5Q96R06 1193 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 PIGSQ96S52 555 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 NAGPAQ9UK23 515 aa25.24■■□□□ 1.63
NPAS3-206ENST00000548645 DCDC2CA8MYV0 355 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 MGRN1O60291 552 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 TDP2O95551 362 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 ZBTB48P10074 688 aaPredicted RBP25.23■■□□□ 1.63
NPAS3-206ENST00000548645 ERFEQ4G0M1 354 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 ALKBH5Q6P6C2 394 aaKnown RBP25.23■■□□□ 1.63
NPAS3-206ENST00000548645 MIEF2Q96C03 454 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 ZNF652Q9Y2D9 606 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.23■■□□□ 1.63
NPAS3-206ENST00000548645 GCFC2P16383 781 aaKnown RBP25.23■■□□□ 1.63
NPAS3-206ENST00000548645 SPDYCQ5MJ68 293 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 NELFCDQ8IXH7 590 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 SLC44A5Q8NCS7 719 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 XPO6Q96QU8 1125 aaKnown RBP25.23■■□□□ 1.63
NPAS3-206ENST00000548645 KCNH2Q12809 1159 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 ERMARDQ5T6L9 678 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 MSL1Q68DK7 614 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 USP17L2Q6R6M4 530 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 CELF1Q92879 486 aaKnown RBP25.23■■□□□ 1.63
NPAS3-206ENST00000548645 TLCD1Q96CP7 247 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 ZNF287Q9HBT7 754 aa25.23■■□□□ 1.63
NPAS3-206ENST00000548645 SUCLA2Q9P2R7 463 aaPredicted RBP25.23■■□□□ 1.63
NPAS3-206ENST00000548645 FLOT1O75955 427 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 RASA1P20936 1047 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 CCDC65Q8IXS2 484 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 SYCE1Q8N0S2 351 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 CCDC197Q8NCU1 140 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 MAST2Q6P0Q8 1798 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 TTI1O43156 1089 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 ITGA4P13612 1032 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 IBSPP21815 317 aaPredicted RBP25.22■■□□□ 1.63
NPAS3-206ENST00000548645 ADAM9Q13443 819 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 ATP6V0A4Q9HBG4 840 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 TBC1D7Q9P0N9 293 aa25.22■■□□□ 1.63
NPAS3-206ENST00000548645 hCG_1984214I3L0E3 225 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 PTPROQ16827 1216 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 HOOK3Q86VS8 718 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 ZNF713Q8N859 430 aaPredicted RBP25.21■■□□□ 1.63
NPAS3-206ENST00000548645 ANKS4BQ8N8V4 417 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 BANK1Q8NDB2 785 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 FAM129AQ9BZQ8 928 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 TRIM37O94972 964 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 ANXA13P27216 316 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 SLFN11Q7Z7L1 901 aa25.21■■□□□ 1.63
NPAS3-206ENST00000548645 SH3RF3Q8TEJ3 882 aaPredicted RBP25.21■■□□□ 1.63
NPAS3-206ENST00000548645 ATP8B3O60423 1300 aa25.2■■□□□ 1.63
NPAS3-206ENST00000548645 MYH7BA7E2Y1 1941 aa25.2■■□□□ 1.63
NPAS3-206ENST00000548645 CCT8L1PA6NM43 557 aa25.2■■□□□ 1.63
NPAS3-206ENST00000548645 F8W031 263 aaPredicted RBP25.2■■□□□ 1.63
NPAS3-206ENST00000548645 CETN3O15182 167 aa25.2■■□□□ 1.63
NPAS3-206ENST00000548645 E2F5Q15329 346 aa25.2■■□□□ 1.63
NPAS3-206ENST00000548645 ATAD5Q96QE3 1844 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms