RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 FOXL1Q12952 345 aa3.65□□□□□ -1.83
CEP290-204ENST00000547926 PAPD7Q5XG87 772 aaKnown RBP3.65□□□□□ -1.83
CEP290-204ENST00000547926 DENND5AQ6IQ26 1287 aa3.65□□□□□ -1.83
CEP290-204ENST00000547926 RBM12BQ8IXT5 1001 aaKnown RBP3.65□□□□□ -1.83
CEP290-204ENST00000547926 CKAP2LQ8IYA6 745 aa3.65□□□□□ -1.83
CEP290-204ENST00000547926 ULK2Q8IYT8 1036 aa3.65□□□□□ -1.83
CEP290-204ENST00000547926 NPLOC4Q8TAT6 608 aa3.65□□□□□ -1.83
CEP290-204ENST00000547926 AJUBAQ96IF1 538 aa3.65□□□□□ -1.83
CEP290-204ENST00000547926 SNRPB2P08579 225 aaKnown RBP3.64□□□□□ -1.83
CEP290-204ENST00000547926 COLEC12Q5KU26 742 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 SPATC1Q76KD6 591 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 TMEM145Q8NBT3 493 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 KREMEN2Q8NCW0 462 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 KATNBL1Q9H079 304 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 EPN3Q9H201 632 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 MSRB2Q9Y3D2 182 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 H0Y858 1186 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 SCG5P05408 212 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 HOXC12P31275 282 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 GLRBP48167 497 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 GFRA1P56159 465 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 SLC25A3Q00325 362 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 TBR1Q16650 682 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 STPG3Q8N7X2 389 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 ZNF764Q96H86 408 aaPredicted RBP3.64□□□□□ -1.83
CEP290-204ENST00000547926 C1orf159Q96HA4 380 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 TMEM209Q96SK2 561 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 MMP19Q99542 508 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 PLA2G12BQ9BX93 195 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 TLR9Q9NR96 1032 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 OAZ3Q9UMX2 235 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 X6R8D5 127 aa3.64□□□□□ -1.83
CEP290-204ENST00000547926 CDC14BO60729 498 aa3.63□□□□□ -1.83
CEP290-204ENST00000547926 LCP1P13796 627 aa3.63□□□□□ -1.83
CEP290-204ENST00000547926 CR2P20023 1033 aa3.63□□□□□ -1.83
CEP290-204ENST00000547926 HIBADHP31937 336 aaKnown RBP3.63□□□□□ -1.83
CEP290-204ENST00000547926 KCNJ6P48051 423 aa3.63□□□□□ -1.83
CEP290-204ENST00000547926 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
CEP290-204ENST00000547926 YOD1Q5VVQ6 348 aaPredicted RBP3.63□□□□□ -1.83
CEP290-204ENST00000547926 NPM2Q86SE8 214 aaKnown RBP3.63□□□□□ -1.83
CEP290-204ENST00000547926 IER2Q9BTL4 223 aa3.63□□□□□ -1.83
CEP290-204ENST00000547926 ARHGEF4Q9NR80 690 aa3.63□□□□□ -1.83
CEP290-204ENST00000547926 ZNF652Q9Y2D9 606 aa3.63□□□□□ -1.83
CEP290-204ENST00000547926 SLC30A1Q9Y6M5 507 aa3.63□□□□□ -1.83
CEP290-204ENST00000547926 TRBV23OR9-2A0A075B6M9 112 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 AGRPO00253 132 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 RRADP55042 308 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 RBL2Q08999 1139 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 LAIR1Q6GTX8 287 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 RIOX2Q8IUF8 465 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 DTX3Q8N9I9 347 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 ST13P5Q8NFI4 369 aaPredicted RBP3.62□□□□□ -1.83
CEP290-204ENST00000547926 NGRNQ9NPE2 291 aaKnown RBP3.62□□□□□ -1.83
CEP290-204ENST00000547926 ZFP69BQ9UJL9 534 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 FAM221BA6H8Z2 402 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 PDPK1O15530 556 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 DLX3O60479 287 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 TADA3O75528 432 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 NUDT3O95989 172 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 IL18BPO95998 194 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 CKMP06732 381 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 C21orf58P58505 322 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 RAC3P60763 192 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 GRIN1Q05586 938 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 SERINC3Q13530 473 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 SMAD2Q15796 467 aaKnown RBP3.62□□□□□ -1.83
CEP290-204ENST00000547926 SLC35F1Q5T1Q4 408 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 MROH9Q5TGP6 573 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 POLNQ7Z5Q5 900 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 PPIL6Q8IXY8 311 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 Q8N1Y9 231 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 RCBTB1Q8NDN9 531 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 TRMT2BQ96GJ1 504 aaKnown RBP3.62□□□□□ -1.83
CEP290-204ENST00000547926 GPRC5BQ9NZH0 403 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 PFDN2Q9UHV9 154 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 PCDHB4Q9Y5E5 795 aa3.62□□□□□ -1.83
CEP290-204ENST00000547926 HGSO14964 777 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 MEFVO15553 781 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 DIAPH1O60610 1272 aaKnown RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 CYP7B1O75881 506 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 CPP00450 1065 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 PDE6AP16499 860 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 ITGB6P18564 788 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 MSX2P35548 267 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 STEAP3Q658P3 488 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 SPTY2D1Q68D10 685 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 VRK3Q8IV63 474 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 DIO2Q92813 273 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 SGSM3Q96HU1 749 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 CCDC140Q96MF4 163 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 DNAJC2Q99543 621 aaKnown RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 HIRIP3Q9BW71 556 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 BLACEA4D250 179 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 PRODHO43272 600 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 ADCY3O60266 1144 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 RPS6KA4O75676 772 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 HSP90AA2PQ14568 343 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 RASA3Q14644 834 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 PCOLCEQ15113 449 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms