RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 CRAMP1Q96RY5 1269 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 CARD11Q9BXL7 1154 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 SLC6A20Q9NP91 592 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 OAZ3Q9UMX2 235 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 PCDHGB7Q9Y5F8 929 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 ERICH3Q5RHP9 1530 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 STRCQ7RTU9 1775 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 PTPRGP23470 1445 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 ENO2P09104 434 aaPredicted RBP3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 ACO1P21399 889 aaKnown RBP3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 TGM1P22735 817 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 RPS19P39019 145 aaKnown RBP3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 PAK2Q13177 524 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 MRGPRGQ86SM5 289 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 C1orf210Q8IVY1 113 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 FUKQ8N0W3 1084 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 CPLX3Q8WVH0 158 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 NEU4Q8WWR8 484 aaPredicted RBP3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 ZG16BQ96DA0 208 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 SCYL1Q96KG9 808 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 KCND1Q9NSA2 647 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 ARHGAP20Q9P2F6 1191 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 ZFP69BQ9UJL9 534 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 PCDHA2Q9Y5H9 948 aa3.97□□□□□ -1.77
DEPDC4-204ENST00000547823 MAGI3Q5TCQ9 1506 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 ITGAVP06756 1048 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 CR2P20023 1033 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 TUBA3CQ13748 450 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 SKIDA1Q1XH10 827 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 LDLRAD1Q5T700 205 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 TUBA3EQ6PEY2 450 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 MAMDC4Q6UXC1 1216 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 DPP8Q6V1X1 898 aaPredicted RBP3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 PROSER1Q86XN7 944 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 ZNF483Q8TF39 744 aaPredicted RBP3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 CACTINQ8WUQ7 758 aaKnown RBP3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 BTN2A2Q8WVV5 523 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 EXTL1Q92935 676 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 SHDQ96IW2 340 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 PLEKHG4BQ96PX9 1271 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 LRP2BPQ9P2M1 347 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 UHRF1BP1LA0JNW5 1464 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 IQSEC2Q5JU85 1478 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 CFAP43Q8NDM7 1665 aa3.96□□□□□ -1.78
DEPDC4-204ENST00000547823 ZCCHC11Q5TAX3 1644 aaKnown RBP3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 LTBP4Q8N2S1 1624 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 ZBTB7CA1YPR0 619 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 U2SURPO15042 1029 aaKnown RBP3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 CYP27B1O15528 508 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 PEX11BO96011 259 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 CKMP06732 381 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 FAHP16930 419 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 POLD1P28340 1107 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 HSPA1LP34931 641 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 ECI1P42126 302 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 CYP4F3Q08477 520 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 GPR155Q7Z3F1 870 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 ZNF227Q86WZ6 799 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 SEC16BQ96JE7 1060 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 ZNF703Q9H7S9 590 aaPredicted RBP3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 WASF3Q9UPY6 502 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 NPFFR2Q9Y5X5 522 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 KDM5BQ9UGL1 1544 aa3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 TTBK1Q5TCY1 1321 aaPredicted RBP3.95□□□□□ -1.78
DEPDC4-204ENST00000547823 PREX1Q8TCU6 1659 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 KCNJ6P48051 423 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 RACK1P63244 317 aaKnown RBP3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 HHEXQ03014 270 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 SPIRE1Q08AE8 756 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 PAN2Q504Q3 1202 aaKnown RBP3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 TMCO4Q5TGY1 634 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 IGFL4Q6B9Z1 124 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 LDLRAD3Q86YD5 345 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 KREMEN2Q8NCW0 462 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 BACH2Q9BYV9 841 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 GPR27Q9NS67 375 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 FBXL7Q9UJT9 491 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 FBXO10Q9UK96 956 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 ARAP3Q8WWN8 1544 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 PTPRTO14522 1441 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 WRNQ14191 1432 aaPredicted RBP eCLIP3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 CD109Q6YHK3 1445 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 YEATS2Q9ULM3 1422 aa3.94□□□□□ -1.78
DEPDC4-204ENST00000547823 TNIKQ9UKE5 1360 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 ZNF839A8K0R7 811 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 SCAMP3O14828 347 aaKnown RBP3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 CDC14BO60729 498 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 ETV4P43268 484 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 GJA8P48165 433 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 GFRA1P56159 465 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 MAP4K2Q12851 820 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 NFYCQ13952 458 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 SV2CQ496J9 727 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 DPY19L2P1Q6NXN4 242 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 RSPO2Q6UXX9 243 aaPredicted RBP3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 Q6ZSN1 163 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 STPG3Q8N7X2 389 aa3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 UHMK1Q8TAS1 419 aaKnown RBP3.93□□□□□ -1.78
DEPDC4-204ENST00000547823 MICAL1Q8TDZ2 1067 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms