RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 RTN4Q9NQC3 1192 aaKnown RBP14.91□□□□□ -0.02
PTCH1-215ENST00000547672 ANKEF1Q9NU02 776 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 RGL1Q9NZL6 768 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 MAPK8IP1Q9UQF2 711 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 PCDHA10Q9Y5I2 948 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 PAPPA2Q9BXP8 1791 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 COL11A1P12107 1806 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-215ENST00000547672 SPATA31C2B4DYI2 1134 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 FAM13AO94988 1023 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 PSAPP07602 524 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 ZBTB48P10074 688 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-215ENST00000547672 GUCY2CP25092 1073 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 RPL13P26373 211 aaKnown RBP14.9□□□□□ -0.02
PTCH1-215ENST00000547672 ICAM3P32942 547 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 ABCD1P33897 745 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 DNM2P50570 870 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 CTTNQ14247 550 aaKnown RBP14.9□□□□□ -0.02
PTCH1-215ENST00000547672 KCTD2Q14681 263 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 ARSHQ5FYA8 562 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 ANKRD40Q6AI12 368 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 RINT1Q6NUQ1 792 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 IL31RAQ8NI17 732 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 CCDC51Q96ER9 411 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 NAP1L5Q96NT1 182 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-215ENST00000547672 MED15Q96RN5 788 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 LXNQ9BS40 222 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 MOV10L1Q9BXT6 1211 aaKnown RBP14.9□□□□□ -0.02
PTCH1-215ENST00000547672 ZHX3Q9H4I2 956 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 OLFML3Q9NRN5 406 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 PTPRFP10586 1907 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 ITIH6Q6UXX5 1313 aa14.9□□□□□ -0.02
PTCH1-215ENST00000547672 CALUO43852 315 aaPredicted RBP14.89□□□□□ -0.03
PTCH1-215ENST00000547672 MAPTP10636 758 aaKnown RBP14.89□□□□□ -0.03
PTCH1-215ENST00000547672 FCER1AP12319 257 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 SCP2P22307 547 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 KCNJ6P48051 423 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 COPB1P53618 953 aaKnown RBP14.89□□□□□ -0.03
PTCH1-215ENST00000547672 KRT31Q15323 416 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 EDRF1Q3B7T1 1238 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 MAP1SQ66K74 1059 aaPredicted RBP14.89□□□□□ -0.03
PTCH1-215ENST00000547672 MIS18BP1Q6P0N0 1132 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 C1orf186Q6ZWK4 172 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 RETREG2Q8NC44 543 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 KIAA0895Q8NCT3 520 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 GOLGA5Q8TBA6 731 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 UIMC1Q96RL1 719 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 NUP58Q9BVL2 599 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 RRAGCQ9HB90 399 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 PARVGQ9HBI0 331 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 BTBD7Q9P203 1132 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 NRBP1Q9UHY1 535 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 PCDHB13Q9Y5F0 798 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 OTOFQ9HC10 1997 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 UBE4BO95155 1302 aa14.89□□□□□ -0.03
PTCH1-215ENST00000547672 A0A1W2PQC6 194 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 EIF3DO15371 548 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTCH1-215ENST00000547672 STRNO43815 780 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 SKILP12757 684 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 MTIF2P46199 727 aaKnown RBP14.88□□□□□ -0.03
PTCH1-215ENST00000547672 PSMC6P62333 389 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 PPP2R3AQ06190 1150 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 ITGB3BPQ13352 177 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-215ENST00000547672 NEDD9Q14511 834 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 TSR1Q2NL82 804 aaKnown RBP14.88□□□□□ -0.03
PTCH1-215ENST00000547672 FKBP15Q5T1M5 1219 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 DLK2Q6UY11 383 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 MOB2Q70IA6 237 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 ANKRD23Q86SG2 305 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 CREBRFQ8IUR6 639 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 GPRC5AQ8NFJ5 357 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 KIAA1524Q8TCG1 905 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 REEP2Q9BRK0 252 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 PAGR1Q9BTK6 254 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 ZNF408Q9H9D4 720 aa14.88□□□□□ -0.03
PTCH1-215ENST00000547672 MRPL44Q9H9J2 332 aaKnown RBP14.88□□□□□ -0.03
PTCH1-215ENST00000547672 LARSQ9P2J5 1176 aaKnown RBP14.88□□□□□ -0.03
PTCH1-215ENST00000547672 ASB14A6NK59 587 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 DDX39AO00148 427 aaKnown RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 PDXKO00764 312 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 CETN3O15182 167 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 TUBB4AP04350 444 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 ERCC3P19447 782 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 YY1P25490 414 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 ALDH5A1P51649 535 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 NOLC1Q14978 699 aaKnown RBP eCLIP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 KNOP1Q1ED39 458 aaKnown RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 GPAT2Q6NUI2 795 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 CNGA4Q8IV77 575 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 ABRAQ8N0Z2 381 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 MYCT1Q8N699 235 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 SMCR8Q8TEV9 937 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 CACTINQ8WUQ7 758 aaKnown RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 DRC1Q96MC2 740 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 ZNF830Q96NB3 372 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 MMP19Q99542 508 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 DUSP9Q99956 384 aaKnown RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 TUBGCP2Q9BSJ2 902 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 NAA15Q9BXJ9 866 aaKnown RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 SEMA6BQ9H3T3 888 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms