RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 EIF3DO15371 548 aaKnown RBP eCLIP16.04■□□□□ 0.16
LETMD1-209ENST00000547318 MYBL2P10244 700 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 NR2F2P24468 414 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 SLC16A2P36021 539 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 CRKP46108 304 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 RAPGEF1Q13905 1077 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 GIT2Q14161 759 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 SLC15A2Q16348 729 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 CERKLQ49MI3 558 aaPredicted RBP16.04■□□□□ 0.16
LETMD1-209ENST00000547318 GLIS3Q8NEA6 775 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 WHAMMQ8TF30 809 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 LMBR1Q8WVP7 490 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 TAF4BQ92750 862 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 CALR3Q96L12 384 aaKnown RBP16.04■□□□□ 0.16
LETMD1-209ENST00000547318 TRIM34Q9BYJ4 488 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 G3V3G9 751 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 PIK3CDO00329 1044 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 MED24O75448 989 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 FLOT1O75955 427 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 XRCC5P13010 732 aaKnown RBP16.04■□□□□ 0.16
LETMD1-209ENST00000547318 EEF2P13639 858 aaKnown RBP16.04■□□□□ 0.16
LETMD1-209ENST00000547318 DCAF8Q5TAQ9 597 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 BTNL9Q6UXG8 535 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 TBC1D5Q92609 795 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 OLFML3Q9NRN5 406 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 SALL4Q9UJQ4 1053 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 RIMBP2O15034 1052 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 PHACTR2O75167 634 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 PALMO75781 387 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 PDE6BP35913 854 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 ATP2B2Q01814 1243 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 KIAA0753Q2KHM9 967 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 ARSHQ5FYA8 562 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 FBXO11Q86XK2 927 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 CD302Q8IX05 232 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 NELFCDQ8IXH7 590 aa16.03■□□□□ 0.16
LETMD1-209ENST00000547318 DMGDHQ9UI17 866 aaKnown RBP16.03■□□□□ 0.16
LETMD1-209ENST00000547318 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.16
LETMD1-209ENST00000547318 EYA4O95677 639 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 NPEPPSP55786 919 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 EXOC3L4Q17RC7 722 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 LRRC31Q6UY01 552 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 STXBP4Q6ZWJ1 553 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 CATSPER3Q86XQ3 398 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 NLGN1Q8N2Q7 840 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.16
LETMD1-209ENST00000547318 SPAG5Q96R06 1193 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 MKNK1Q9BUB5 465 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 SEL1LQ9UBV2 794 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 RRP15Q9Y3B9 282 aaKnown RBP16.02■□□□□ 0.16
LETMD1-209ENST00000547318 ATRNL1Q5VV63 1379 aa16.02■□□□□ 0.16
LETMD1-209ENST00000547318 USP17L15C9J2P7 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L13C9JLJ4 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L11C9JVI0 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L18D6R9N7 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L22D6RA61 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L17D6RBQ6 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L19D6RCP7 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L20D6RJB6 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 F8W031 263 aaPredicted RBP16.02■□□□□ 0.15
LETMD1-209ENST00000547318 TBCAO75347 108 aaKnown RBP16.02■□□□□ 0.15
LETMD1-209ENST00000547318 SKOR1P84550 965 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 ICA1Q05084 483 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L24Q0WX57 530 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 STRIP1Q5VSL9 837 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 USP17L6PQ6QN14 398 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 SYCE1Q8N0S2 351 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 TUFT1Q9NNX1 390 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 RBM12Q9NTZ6 932 aaKnown RBP16.02■□□□□ 0.15
LETMD1-209ENST00000547318 KCND2Q9NZV8 630 aa16.02■□□□□ 0.15
LETMD1-209ENST00000547318 A0A087X0T9 212 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 BUB1O43683 1085 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 ZMYND10O75800 440 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 FAM228BP0C875 321 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 UCHL3P15374 230 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 KLRC1P26715 233 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 IRX5P78411 483 aaPredicted RBP16.01■□□□□ 0.15
LETMD1-209ENST00000547318 CLUL1Q15846 466 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 SYDE2Q5VT97 1194 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 ACTRT1Q8TDG2 376 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 RASSF4Q9H2L5 321 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 EHMT1Q9H9B1 1298 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 ADAMTSL1Q8N6G6 1762 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 LOXHD1Q8IVV2 1947 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 CCDC188H7C350 402 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 MYO1CO00159 1063 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 CCDC172P0C7W6 258 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 SPATA31C1P0DKV0 1188 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 FERP16591 822 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 RPS6KA1Q15418 735 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 PRR16Q569H4 304 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 EMC10Q5UCC4 262 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 POTEEQ6S8J3 1075 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 IRF2BP2Q7Z5L9 587 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 FAM133AQ8N9E0 248 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms