RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 SREBF1P36956 1147 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 LAMC2Q13753 1193 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 PGM5Q15124 567 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 NEK8Q86SG6 692 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 TBCKQ8TEA7 893 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 EMID1Q96A84 441 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-226ENST00000547259 VWCEQ96DN2 955 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 ZDHHC9Q9Y397 364 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 MTCH2Q9Y6C9 303 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 BMP1P13497 986 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 SELPP16109 830 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 ARHGAP4P98171 946 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 RBL2Q08999 1139 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 SEPT14Q6ZU15 432 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 C7orf31Q8N865 590 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 AFG1LQ8WV93 481 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 PDCD2LQ9BRP1 358 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 ZBED2Q9BTP6 218 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 REV3LO60673 3130 aa13.67□□□□□ -0.22
HDAC7-226ENST00000547259 XIRP2A4UGR9 3374 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 NR3C2P08235 984 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 MMP3P08254 477 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 MYCLP12524 364 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-226ENST00000547259 CCND2P30279 289 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 ZNF76P36508 570 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 TAP1Q03518 808 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 FOXD4L6Q3SYB3 417 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-226ENST00000547259 RILPL1Q5EBL4 403 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 PCNX4Q63HM2 1172 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 CNKSR3Q6P9H4 555 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 FOXD4L3Q6VB84 417 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-226ENST00000547259 LRRC8DQ7L1W4 858 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 IL31RAQ8NI17 732 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 ARNTL2Q8WYA1 636 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 COPS5Q92905 334 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 HLA-CQ95604 372 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
HDAC7-226ENST00000547259 TCHHQ07283 1943 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 CCNT1O60563 726 aaKnown RBP13.65□□□□□ -0.22
HDAC7-226ENST00000547259 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 ARIH2O95376 493 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 TGFB3P10600 412 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 TRAPPC10P48553 1259 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 IKBKEQ14164 716 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 LY6KQ17RY6 165 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 TTC38Q5R3I4 469 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 XRRA1Q6P2D8 792 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 FAM173BQ6P4H8 233 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
HDAC7-226ENST00000547259 PPTC7Q8NI37 304 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 RAD9AQ99638 391 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
HDAC7-226ENST00000547259 GTF2IRD1Q9UHL9 959 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 DDX41Q9UJV9 622 aaKnown RBP13.65□□□□□ -0.22
HDAC7-226ENST00000547259 MRVI1Q9Y6F6 885 aa13.65□□□□□ -0.22
HDAC7-226ENST00000547259 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 DOCK5Q9H7D0 1870 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 TDP2O95551 362 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 CXCL10P02778 98 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 CYP3A4P08684 503 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 GCFC2P16383 781 aaKnown RBP13.64□□□□□ -0.23
HDAC7-226ENST00000547259 USP11P51784 963 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 PTK7Q13308 1070 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 NBR1Q14596 966 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 GDF6Q6KF10 455 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-226ENST00000547259 CRYGNQ8WXF5 182 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 ZFP91Q96JP5 570 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-226ENST00000547259 ZNF396Q96N95 335 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-226ENST00000547259 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
HDAC7-226ENST00000547259 WNT7AO00755 349 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 STAM2O75886 525 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 F2P00734 622 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 CKBP12277 381 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 MCM7P33993 719 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 PSEN2P49810 448 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 TOB1P50616 345 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-226ENST00000547259 WDR5P61964 334 aaKnown RBP13.63□□□□□ -0.23
HDAC7-226ENST00000547259 MRPS9P82933 396 aaKnown RBP13.63□□□□□ -0.23
HDAC7-226ENST00000547259 MOXD1Q6UVY6 613 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 VSIG10LQ86VR7 867 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 MXRA8Q9BRK3 442 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 CERS4Q9HA82 394 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
HDAC7-226ENST00000547259 DDX25Q9UHL0 483 aaKnown RBP13.63□□□□□ -0.23
HDAC7-226ENST00000547259 ARIH1Q9Y4X5 557 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-226ENST00000547259 RFXAPO00287 272 aa13.62□□□□□ -0.23
HDAC7-226ENST00000547259 GJB5O95377 273 aa13.62□□□□□ -0.23
HDAC7-226ENST00000547259 NCLP19338 710 aaKnown RBP13.62□□□□□ -0.23
HDAC7-226ENST00000547259 CIITAP33076 1130 aa13.62□□□□□ -0.23
HDAC7-226ENST00000547259 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-226ENST00000547259 TFF2Q03403 129 aa13.62□□□□□ -0.23
HDAC7-226ENST00000547259 CEBPZQ03701 1054 aaKnown RBP13.62□□□□□ -0.23
HDAC7-226ENST00000547259 GRB10Q13322 594 aa13.62□□□□□ -0.23
HDAC7-226ENST00000547259 ORC2Q13416 577 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms