RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 IFNAR1P17181 557 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 ARHGAP4P98171 946 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 MARCH8Q5T0T0 291 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 JAKMIP3Q5VZ66 844 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 RNF26Q9BY78 433 aaPredicted RBP11.77□□□□□ -0.53
BEST3-208ENST00000547208 TM6SF1Q9BZW5 370 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 JPH1Q9HDC5 661 aaPredicted RBP11.77□□□□□ -0.53
BEST3-208ENST00000547208 ERAP1Q9NZ08 941 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 SLC9A2Q9UBY0 812 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 NRCAMQ92823 1304 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 COL4A6Q14031 1691 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 PRRC2BQ5JSZ5 2229 aaKnown RBP11.76□□□□□ -0.53
BEST3-208ENST00000547208 LCHNA4D1U4 455 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 MBLAC1A4D2B0 266 aaPredicted RBP11.76□□□□□ -0.53
BEST3-208ENST00000547208 EPOPA6NHQ4 379 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 EDIL3O43854 480 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 ATG7O95352 703 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 CCNE2O96020 404 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 CYP3A4P08684 503 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 GNAT1P11488 350 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 MARK3P27448 753 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 KCNJ6P48051 423 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
BEST3-208ENST00000547208 ACTR2P61160 394 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
BEST3-208ENST00000547208 TAP1Q03518 808 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 PLEKHG4Q58EX7 1191 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 FAM26DQ5JW98 314 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 NIPA1Q7RTP0 329 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 SPRED2Q7Z698 418 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 RPAINQ86UA6 219 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 DBF4BQ8NFT6 615 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 GAS2L1Q99501 681 aaPredicted RBP11.76□□□□□ -0.53
BEST3-208ENST00000547208 UPF3BQ9BZI7 483 aaKnown RBP11.76□□□□□ -0.53
BEST3-208ENST00000547208 SMARCAD1Q9H4L7 1026 aa11.76□□□□□ -0.53
BEST3-208ENST00000547208 IGKV6D-21A0A0A0MT36 114 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 TNFRSF10AO00220 468 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 DHX15O43143 795 aaKnown RBP11.75□□□□□ -0.53
BEST3-208ENST00000547208 GJB5O95377 273 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 CHRNA1P02708 482 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 CTSHP09668 335 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 MGAT3Q09327 533 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 PPFIA1Q13136 1202 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 IKBKEQ14164 716 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 GRIK4Q16099 956 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
BEST3-208ENST00000547208 REXO1Q8N1G1 1221 aaKnown RBP11.75□□□□□ -0.53
BEST3-208ENST00000547208 PIP4P2Q8N4L2 257 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 ZBTB10Q96DT7 871 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
BEST3-208ENST00000547208 SLC26A6Q9BXS9 759 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 C6orf50Q9HD87 102 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 CYP46A1Q9Y6A2 500 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 XIRP2A4UGR9 3374 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 TTC3P53804 2025 aa11.75□□□□□ -0.53
BEST3-208ENST00000547208 RFXAPO00287 272 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 TLL1O43897 1013 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 EFCAB14O75071 495 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 CIITAP33076 1130 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 TJAP1Q5JTD0 557 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 TAF2Q6P1X5 1199 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 PLPPR4Q7Z2D5 763 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 PLA2G4DQ86XP0 818 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 RASGRP4Q8TDF6 673 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 CCDC12Q8WUD4 166 aaPredicted RBP11.74□□□□□ -0.53
BEST3-208ENST00000547208 GLG1Q92896 1179 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 LENG9Q96B70 501 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 ZNF274Q96GC6 653 aaPredicted RBP11.74□□□□□ -0.53
BEST3-208ENST00000547208 SDF4Q9BRK5 362 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 CERS4Q9HA82 394 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 VPS54Q9P1Q0 977 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 TUBE1Q9UJT0 475 aa11.74□□□□□ -0.53
BEST3-208ENST00000547208 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.73□□□□□ -0.53
BEST3-208ENST00000547208 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 M0R2N6 131 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
BEST3-208ENST00000547208 LPXNO60711 386 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 INSRRP14616 1297 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 POU3F3P20264 500 aaPredicted RBP11.73□□□□□ -0.53
BEST3-208ENST00000547208 GNA11P29992 359 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 PLCB4Q15147 1175 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 NPY5RQ15761 445 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 MCTP2Q6DN12 878 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 ABHD15Q6UXT9 468 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 IL17RAQ96F46 866 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 SH3GLB2Q9NR46 395 aa11.73□□□□□ -0.53
BEST3-208ENST00000547208 FNDC1Q4ZHG4 1894 aaPredicted RBP11.72□□□□□ -0.53
BEST3-208ENST00000547208 BDP1A6H8Y1 2624 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 DDX39AO00148 427 aaKnown RBP11.72□□□□□ -0.53
BEST3-208ENST00000547208 IGFBP4P22692 258 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 ZNF76P36508 570 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 STAT5BP51692 787 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 HTRA4P83105 476 aaPredicted RBP11.72□□□□□ -0.53
BEST3-208ENST00000547208 AKAP17AQ02040 695 aaKnown RBP11.72□□□□□ -0.53
BEST3-208ENST00000547208 TFF2Q03403 129 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 CCDC60Q8IWA6 550 aaPredicted RBP11.72□□□□□ -0.53
BEST3-208ENST00000547208 CCDC148Q8NFR7 591 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms