RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PPTC7Q8NI37 304 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 NACC1Q96RE7 527 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 LXNQ9BS40 222 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 CLSTN2Q9H4D0 955 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 AZI2Q9H6S1 392 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 KIAA1024Q9UPX6 916 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 LOXHD1Q8IVV2 1947 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 A0A087X0B3 334 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 POTEB3A0JP26 581 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 SEPT4O43236 478 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 ACTN4O43707 911 aaKnown RBP17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 MYL1P05976 194 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 XRCC6P12956 609 aaKnown RBP eCLIP17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 ELNP15502 786 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 GRK4P32298 578 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 CTCFP49711 727 aaPredicted RBP17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 CYP4A11Q02928 519 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 CACNB2Q08289 660 aaPredicted RBP17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 LONRF3Q496Y0 759 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 POTEBQ6S5H4 581 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 C4orf19Q8IY42 314 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 OR6J1Q8NGC5 347 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 LARP4BQ92615 738 aaKnown RBP17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 PNMA5Q96PV4 448 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 GPR20Q99678 358 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 AP5M1Q9H0R1 490 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 TNMDQ9H2S6 317 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 RGL1Q9NZL6 768 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 SERTAD1Q9UHV2 236 aa17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 GNEQ9Y223 722 aaKnown RBP17.71■□□□□ 0.43
TRAFD1-203ENST00000547063 IGKV6D-21A0A0A0MT36 114 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 POTEFA5A3E0 1075 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 DUSP11O75319 330 aaKnown RBP17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 PPFIA4O75335 1185 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 TCF7P36402 384 aaPredicted RBP17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 SLC26A2P50443 739 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 MAP3K21Q5TCX8 1036 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 SWSAP1Q6NVH7 229 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 POTEGQ6S5H5 508 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 SV2BQ7L1I2 683 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 TLK2Q86UE8 772 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 BANK1Q8NDB2 785 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 RAD54LQ92698 747 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 COPS5Q92905 334 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 PLIN2Q99541 437 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 BCAS3Q9H6U6 928 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 SPC25Q9HBM1 224 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 ZNF302Q9NR11 478 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 GABBR1Q9UBS5 961 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 PTPN22Q9Y2R2 807 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 EMSYQ7Z589 1322 aa17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 MYH9P35579 1960 aaKnown RBP17.7■□□□□ 0.42
TRAFD1-203ENST00000547063 SORBS3O60504 671 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 MSCO60682 206 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 EYA4O95677 639 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 RARBP10826 455 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 HSPA8P11142 646 aaKnown RBP17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 CNGA1P29973 690 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 CPT1AP50416 773 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 DGKDQ16760 1214 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 HSDL1Q3SXM5 330 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 PDXDC2PQ6P474 469 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 OTUD6AQ7L8S5 288 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 FAM167AQ96KS9 214 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 SMARCAD1Q9H4L7 1026 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 PTCH2Q9Y6C5 1203 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 IGSF9BQ9UPX0 1349 aa17.69■□□□□ 0.42
TRAFD1-203ENST00000547063 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 LGR5O75473 907 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 STAT5BP51692 787 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 ECM1Q16610 540 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 PLPPR4Q7Z2D5 763 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 CTU1Q7Z7A3 348 aaKnown RBP17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 CCDC60Q8IWA6 550 aaPredicted RBP17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 TRPV1Q8NER1 839 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 AFG1LQ8WV93 481 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 GLG1Q92896 1179 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 CCDC43Q96MW1 224 aaKnown RBP17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 BMP2KQ9NSY1 1161 aaPredicted RBP17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 ANKEF1Q9NU02 776 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 BLOC1S4Q9NUP1 217 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 KBTBD4Q9NVX7 518 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 TMEM63CQ9P1W3 806 aa17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 DBR1Q9UK59 544 aaKnown RBP17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 MAFBQ9Y5Q3 323 aaPredicted RBP17.68■□□□□ 0.42
TRAFD1-203ENST00000547063 A6NJR5 290 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 FOXN1O15353 648 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 INHAP05111 366 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 PLA2G4BP0C869 781 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 HSPA1AP0DMV8 641 aaKnown RBP17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 HSPA1BP0DMV9 641 aaKnown RBP17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 HOXD8P13378 290 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms