RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 HLA-CQ95604 372 aa21.4■■□□□ 1.02
CHPT1-202ENST00000546490 TOP1MTQ969P6 601 aa21.4■■□□□ 1.02
CHPT1-202ENST00000546490 PGBD1Q96JS3 809 aa21.4■■□□□ 1.02
CHPT1-202ENST00000546490 SAMD11Q96NU1 681 aa21.4■■□□□ 1.02
CHPT1-202ENST00000546490 AZI2Q9H6S1 392 aa21.4■■□□□ 1.02
CHPT1-202ENST00000546490 V9GY48 417 aaPredicted RBP21.4■■□□□ 1.02
CHPT1-202ENST00000546490 ATG2AQ2TAZ0 1938 aa21.39■■□□□ 1.02
CHPT1-202ENST00000546490 BRWD1Q9NSI6 2320 aa21.39■■□□□ 1.02
CHPT1-202ENST00000546490 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.39■■□□□ 1.01
CHPT1-202ENST00000546490 MBLAC1A4D2B0 266 aaPredicted RBP21.39■■□□□ 1.01
CHPT1-202ENST00000546490 SMCO2A6NFE2 343 aa21.39■■□□□ 1.01
CHPT1-202ENST00000546490 GHRP10912 638 aa21.39■■□□□ 1.01
CHPT1-202ENST00000546490 METAP2P50579 478 aaKnown RBP eCLIP21.39■■□□□ 1.011e-6■■■■■ 27.4
CHPT1-202ENST00000546490 KCNQ1P51787 676 aa21.39■■□□□ 1.01
CHPT1-202ENST00000546490 CEP55Q53EZ4 464 aa21.39■■□□□ 1.01
CHPT1-202ENST00000546490 TNPO1Q92973 898 aaKnown RBP21.39■■□□□ 1.01
CHPT1-202ENST00000546490 C17orf80Q9BSJ5 609 aa21.39■■□□□ 1.01
CHPT1-202ENST00000546490 OSBPL7Q9BZF2 842 aa21.39■■□□□ 1.01
CHPT1-202ENST00000546490 WDR81Q562E7 1941 aa21.39■■□□□ 1.01
CHPT1-202ENST00000546490 CCDC196A0A1B0GTZ2 297 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 UPP2O95045 317 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 CHRNA1P02708 482 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 BMP1P13497 986 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 SREBF1P36956 1147 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 IGBP1P78318 339 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 MGAT3Q09327 533 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 TRPC6Q9Y210 931 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 KIAA1671Q9BY89 1806 aa21.38■■□□□ 1.01
CHPT1-202ENST00000546490 NID2Q14112 1375 aa21.37■■□□□ 1.01
CHPT1-202ENST00000546490 RRN3P2A6NIE6 340 aa21.37■■□□□ 1.01
CHPT1-202ENST00000546490 CDC27P30260 824 aa21.37■■□□□ 1.01
CHPT1-202ENST00000546490 CLK2P49760 499 aaKnown RBP21.37■■□□□ 1.01
CHPT1-202ENST00000546490 ACTR2P61160 394 aa21.37■■□□□ 1.01
CHPT1-202ENST00000546490 CYP2W1Q8TAV3 490 aa21.37■■□□□ 1.01
CHPT1-202ENST00000546490 JAKMIP1Q96N16 626 aaKnown RBP21.37■■□□□ 1.01
CHPT1-202ENST00000546490 PCYT2Q99447 389 aa21.37■■□□□ 1.01
CHPT1-202ENST00000546490 FAM217BQ9NTX9 383 aaPredicted RBP21.37■■□□□ 1.01
CHPT1-202ENST00000546490 TTC3P53804 2025 aa21.36■■□□□ 1.01
CHPT1-202ENST00000546490 INSRRP14616 1297 aa21.36■■□□□ 1.01
CHPT1-202ENST00000546490 ZNF76P36508 570 aa21.36■■□□□ 1.01
CHPT1-202ENST00000546490 PFKFB3Q16875 520 aaPredicted RBP21.36■■□□□ 1.01
CHPT1-202ENST00000546490 MARCH8Q5T0T0 291 aa21.36■■□□□ 1.01
CHPT1-202ENST00000546490 BLOC1S2Q6QNY1 142 aa21.36■■□□□ 1.01
CHPT1-202ENST00000546490 CCDC12Q8WUD4 166 aaPredicted RBP21.36■■□□□ 1.01
CHPT1-202ENST00000546490 DNAJB3Q8WWF6 145 aa21.36■■□□□ 1.01
CHPT1-202ENST00000546490 AGO4Q9HCK5 861 aaKnown RBP21.36■■□□□ 1.01
CHPT1-202ENST00000546490 TMEM260Q9NX78 707 aa21.36■■□□□ 1.01
CHPT1-202ENST00000546490 CDY2AQ9Y6F7 541 aa21.36■■□□□ 1.01
CHPT1-202ENST00000546490 M0QZ92 97 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 ARP10275 920 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 SCG2P13521 617 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 MRPS6P82932 125 aaKnown RBP21.35■■□□□ 1.01
CHPT1-202ENST00000546490 APOBRQ0VD83 1088 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 ITGB3BPQ13352 177 aaPredicted RBP21.35■■□□□ 1.01
CHPT1-202ENST00000546490 LPIN1Q14693 890 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 PTPROQ16827 1216 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 EPC2Q52LR7 807 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 FBXO47Q5MNV8 452 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 TSHZ1Q6ZSZ6 1077 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 Q6ZUG5 572 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 NIPA1Q7RTP0 329 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 PLPPR4Q7Z2D5 763 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 KCNB2Q92953 911 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 BRF1Q92994 677 aa21.35■■□□□ 1.01
CHPT1-202ENST00000546490 NECAB3Q96P71 396 aaPredicted RBP21.35■■□□□ 1.01
CHPT1-202ENST00000546490 FAM49AQ9H0Q0 323 aaPredicted RBP21.35■■□□□ 1.01
CHPT1-202ENST00000546490 EVPLQ92817 2033 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 ESYT2A0FGR8 921 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 MEIS1O00470 390 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 CPA1P15085 419 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 HSPA4P34932 840 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 ADD1P35611 737 aaKnown RBP21.34■■□□□ 1.01
CHPT1-202ENST00000546490 SLC26A2P50443 739 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 STAT5BP51692 787 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 PLCB4Q15147 1175 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 IER5Q5VY09 327 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 MCTP2Q6DN12 878 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
CHPT1-202ENST00000546490 ADGRA3Q8IWK6 1321 aa21.33■■□□□ 1.01
CHPT1-202ENST00000546490 TIGD5Q53EQ6 642 aa21.33■■□□□ 1.01
CHPT1-202ENST00000546490 JAKMIP3Q5VZ66 844 aa21.33■■□□□ 1.01
CHPT1-202ENST00000546490 MRPL38Q96DV4 380 aaKnown RBP21.33■■□□□ 1.01
CHPT1-202ENST00000546490 IL17RAQ96F46 866 aa21.33■■□□□ 1.01
CHPT1-202ENST00000546490 C6orf50Q9HD87 102 aa21.33■■□□□ 1.01
CHPT1-202ENST00000546490 TRPV2Q9Y5S1 764 aa21.33■■□□□ 1.01
CHPT1-202ENST00000546490 SNX14Q9Y5W7 946 aa21.33■■□□□ 1.01
CHPT1-202ENST00000546490 H3BNC9 293 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 DDX39AO00148 427 aaKnown RBP21.32■■□□□ 1
CHPT1-202ENST00000546490 REC8O95072 547 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 SETQ01105 290 aaPredicted RBP21.32■■□□□ 1
CHPT1-202ENST00000546490 FAM160B1Q5W0V3 765 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 PLA2G4DQ86XP0 818 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 TMEM192Q8IY95 271 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 REXO1Q8N1G1 1221 aaKnown RBP21.32■■□□□ 1
CHPT1-202ENST00000546490 FIBCD1Q8N539 461 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 ZBTB10Q96DT7 871 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 ZMYND12Q9H0C1 365 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 UBE2ZQ9H832 354 aaPredicted RBP21.32■■□□□ 1
CHPT1-202ENST00000546490 PCDHA2Q9Y5H9 948 aa21.32■■□□□ 1
CHPT1-202ENST00000546490 SQORQ9Y6N5 450 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms