RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 GLG1Q92896 1179 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 PNPLA7Q6ZV29 1317 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 LRRC10BA6NIK2 292 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 SEMA3EO15041 775 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 HIBCHQ6NVY1 386 aaPredicted RBP16.06■□□□□ 0.16
HOXC11-202ENST00000546378 GPBP1Q86WP2 473 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 TNFRSF25Q93038 417 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 FAM118BQ9BPY3 351 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 PANK4Q9NVE7 773 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 ZBTB21Q9ULJ3 1066 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 NF2P35240 595 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 ASIC2Q16515 512 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 MFSD14BQ5SR56 506 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 TMED8Q6PL24 325 aaPredicted RBP16.06■□□□□ 0.16
HOXC11-202ENST00000546378 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
HOXC11-202ENST00000546378 CCDC91Q7Z6B0 441 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
HOXC11-202ENST00000546378 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 BBOX1O75936 387 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 SLC15A2Q16348 729 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 HP1BP3Q5SSJ5 553 aaPredicted RBP16.05■□□□□ 0.16
HOXC11-202ENST00000546378 POTEGQ6S5H5 508 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 POTEEQ6S8J3 1075 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 CTNNBL1Q8WYA6 563 aaPredicted RBP16.05■□□□□ 0.16
HOXC11-202ENST00000546378 CEP95Q96GE4 821 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 NUP58Q9BVL2 599 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 LEMD3Q9Y2U8 911 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 SNX24Q9Y343 169 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 DDAH1O94760 285 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 RHOBTB3O94955 611 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 RBM5P52756 815 aaKnown RBP eCLIP16.05■□□□□ 0.16
HOXC11-202ENST00000546378 MYOCDQ8IZQ8 938 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 TSGA10Q9BZW7 698 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 CXorf56Q9H5V9 222 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 CD209Q9NNX6 404 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 TBK1Q9UHD2 729 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 GRIN2DO15399 1336 aa16.05■□□□□ 0.16
HOXC11-202ENST00000546378 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
HOXC11-202ENST00000546378 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 PNMA2Q9UL42 364 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 PPP1R37O75864 691 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 NR2F2P24468 414 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 SSR1P43307 286 aaKnown RBP16.04■□□□□ 0.16
HOXC11-202ENST00000546378 ECM1Q16610 540 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 FAM26FQ5R3K3 315 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 KIF2BQ8N4N8 673 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 DHTKD1Q96HY7 919 aaPredicted RBP16.04■□□□□ 0.16
HOXC11-202ENST00000546378 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 NEUROG2Q9H2A3 272 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 KCNK9Q9NPC2 374 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 H0YIN7 160 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 DDX39AO00148 427 aaKnown RBP16.04■□□□□ 0.16
HOXC11-202ENST00000546378 NEBLO76041 1014 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 BAG6P46379 1132 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 KCNA1Q09470 495 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 CCDC170Q8IYT3 715 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 KCNV2Q8TDN2 545 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 OSGEPQ9NPF4 335 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 MAD2L2Q9UI95 211 aa16.04■□□□□ 0.16
HOXC11-202ENST00000546378 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 MEFVO15553 781 aaPredicted RBP16.03■□□□□ 0.16
HOXC11-202ENST00000546378 ZBTB7AO95365 584 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 CYP2J2P51589 502 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 SLC20A2Q08357 652 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
HOXC11-202ENST00000546378 CCDC13Q8IYE1 715 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 GDAP1Q8TB36 358 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 MYCBPAPQ8TBZ2 947 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 PIGOQ8TEQ8 1089 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 PLAGL2Q9UPG8 496 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
HOXC11-202ENST00000546378 C4BP0C0L5 1744 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
HOXC11-202ENST00000546378 STXBP3O00186 592 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 SART1O43290 800 aaKnown RBP16.03■□□□□ 0.16
HOXC11-202ENST00000546378 FGGP02679 453 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 TUBBP07437 444 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
HOXC11-202ENST00000546378 CLNS1AP54105 237 aaKnown RBP16.03■□□□□ 0.16
HOXC11-202ENST00000546378 ERVK-9P63128 1117 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 PTK2Q05397 1052 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 B4GALNT4Q76KP1 1039 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 ELAC2Q9BQ52 826 aaKnown RBP16.03■□□□□ 0.16
HOXC11-202ENST00000546378 CEP83Q9Y592 693 aa16.03■□□□□ 0.16
HOXC11-202ENST00000546378 SNX1Q13596 522 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 PRR16Q569H4 304 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.16
HOXC11-202ENST00000546378 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 C4orf32Q8N8J7 132 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 KBTBD4Q9NVX7 518 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 NR2E1Q9Y466 385 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 L3MBTL1Q9Y468 752 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 BAZ2AQ9UIF9 1905 aaKnown RBP16.02■□□□□ 0.16
HOXC11-202ENST00000546378 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
HOXC11-202ENST00000546378 ATP2B4P23634 1241 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 HSD17B3P37058 310 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 AARSP49588 968 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms