RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PTPN11Q06124 597 aaPredicted RBP23.07■■□□□ 1.28
HMGA2-211ENST00000545998 FAM126BQ8IXS8 530 aa23.07■■□□□ 1.28
HMGA2-211ENST00000545998 RNPEPQ9H4A4 650 aa23.07■■□□□ 1.28
HMGA2-211ENST00000545998 ZNF302Q9NR11 478 aa23.07■■□□□ 1.28
HMGA2-211ENST00000545998 EVI5O60447 810 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 MARK3P27448 753 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 FAM47CQ5HY64 1035 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 FAM160B1Q5W0V3 765 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 FAM173BQ6P4H8 233 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 C7orf31Q8N865 590 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 HDAC6Q9UBN7 1215 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 GTF2IRD1Q9UHL9 959 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 MAFBQ9Y5Q3 323 aaPredicted RBP23.06■■□□□ 1.28
HMGA2-211ENST00000545998 LAD1O00515 517 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 CD4P01730 458 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 SLC26A2P50443 739 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 GABBR1Q9UBS5 961 aa23.06■■□□□ 1.28
HMGA2-211ENST00000545998 IGSF9BQ9UPX0 1349 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 DCDC2CA8MYV0 355 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 B4GALT4O60513 344 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 SMIM10L2AP0DMW4 78 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 SMIM10L2BP0DMW5 78 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 ANP32AP39687 249 aaKnown RBP23.05■■□□□ 1.28
HMGA2-211ENST00000545998 ATP2C1P98194 919 aaPredicted RBP23.05■■□□□ 1.28
HMGA2-211ENST00000545998 FAAP100Q0VG06 881 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 PDXDC2PQ6P474 469 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 C7orf61Q8IZ16 206 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 TRPV6Q9H1D0 765 aa23.05■■□□□ 1.28
HMGA2-211ENST00000545998 F13A1P00488 732 aa23.04■■□□□ 1.28
HMGA2-211ENST00000545998 ATP4AP20648 1035 aa23.04■■□□□ 1.28
HMGA2-211ENST00000545998 HOXC8P31273 242 aa23.04■■□□□ 1.28
HMGA2-211ENST00000545998 PLCB4Q15147 1175 aa23.04■■□□□ 1.28
HMGA2-211ENST00000545998 UGCGQ16739 394 aa23.04■■□□□ 1.28
HMGA2-211ENST00000545998 FOXD4L5Q5VV16 416 aaPredicted RBP23.04■■□□□ 1.28
HMGA2-211ENST00000545998 NCAPH2Q6IBW4 605 aa23.04■■□□□ 1.28
HMGA2-211ENST00000545998 GDF6Q6KF10 455 aaPredicted RBP23.04■■□□□ 1.28
HMGA2-211ENST00000545998 FOXD4L4Q8WXT5 416 aaPredicted RBP23.04■■□□□ 1.28
HMGA2-211ENST00000545998 TRMT13Q9NUP7 481 aaKnown RBP23.04■■□□□ 1.28
HMGA2-211ENST00000545998 PRPHP41219 470 aa23.03■■□□□ 1.28
HMGA2-211ENST00000545998 TECP42680 631 aa23.03■■□□□ 1.28
HMGA2-211ENST00000545998 HIC1Q14526 733 aa23.03■■□□□ 1.28
HMGA2-211ENST00000545998 EPHA7Q15375 998 aa23.03■■□□□ 1.28
HMGA2-211ENST00000545998 TLR3O15455 904 aaKnown RBP23.02■■□□□ 1.28
HMGA2-211ENST00000545998 ZNF862O60290 1169 aa23.02■■□□□ 1.28
HMGA2-211ENST00000545998 BRD1O95696 1058 aa23.02■■□□□ 1.28
HMGA2-211ENST00000545998 CLTBP09497 229 aa23.02■■□□□ 1.28
HMGA2-211ENST00000545998 FXR2P51116 673 aaKnown RBP eCLIP23.02■■□□□ 1.28
HMGA2-211ENST00000545998 SF3A1Q15459 793 aaKnown RBP23.02■■□□□ 1.28
HMGA2-211ENST00000545998 FTOQ9C0B1 505 aaKnown RBP eCLIP23.02■■□□□ 1.28
HMGA2-211ENST00000545998 PDLIM7Q9NR12 457 aa23.02■■□□□ 1.28
HMGA2-211ENST00000545998 ZDHHC9Q9Y397 364 aa23.02■■□□□ 1.28
HMGA2-211ENST00000545998 POTEB3A0JP26 581 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 POTEMA6NI47 508 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 BMP15O95972 392 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 IL17AQ16552 155 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 POTEBQ6S5H4 581 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 ATP8B4Q8TF62 1192 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 CTAGE1Q96RT6 745 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 SETD4Q9NVD3 440 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 CLIC4Q9Y696 253 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 RANBP2P49792 3224 aaKnown RBP23.01■■□□□ 1.27
HMGA2-211ENST00000545998 NRCAMQ92823 1304 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 C17orf102A2RUQ5 167 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 DDIT3P35638 169 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 ADAM17P78536 824 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 ZNF200P98182 395 aaPredicted RBP23.01■■□□□ 1.27
HMGA2-211ENST00000545998 PTGISQ16647 500 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 TMEM266Q2M3C6 531 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 SH3RF1Q7Z6J0 888 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 BANK1Q8NDB2 785 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 ATP6V0A1Q93050 837 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 CEP131Q9UPN4 1083 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 TRPC6Q9Y210 931 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 NR2E3Q9Y5X4 410 aa23.01■■□□□ 1.27
HMGA2-211ENST00000545998 P4HBP07237 508 aaKnown RBP23■■□□□ 1.27
HMGA2-211ENST00000545998 QARSP47897 775 aaKnown RBP23■■□□□ 1.27
HMGA2-211ENST00000545998 PSMC5P62195 406 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 PRKCEQ02156 737 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 PPFIA1Q13136 1202 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 ARL6IP4Q66PJ3 421 aaKnown RBP23■■□□□ 1.27
HMGA2-211ENST00000545998 DTHD1Q6ZMT9 781 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 CKAP2LQ8IYA6 745 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 IGSF22Q8N9C0 903 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 LMBR1Q8WVP7 490 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 BBXQ8WY36 941 aaPredicted RBP23■■□□□ 1.27
HMGA2-211ENST00000545998 TNPO1Q92973 898 aaKnown RBP23■■□□□ 1.27
HMGA2-211ENST00000545998 HSD17B14Q9BPX1 270 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 EIF2AK1Q9BQI3 630 aaKnown RBP23■■□□□ 1.27
HMGA2-211ENST00000545998 TSHZ2Q9NRE2 1034 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 TMEM39AQ9NV64 488 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 TBX21Q9UL17 535 aa23■■□□□ 1.27
HMGA2-211ENST00000545998 TRIM43BA6NCK2 446 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 HBP1O60381 514 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 GNAT1P11488 350 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 INSRRP14616 1297 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 PDIA5Q14554 519 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 PTPAQ15257 358 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 GRIK4Q16099 956 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 TRIM43Q96BQ3 446 aaPredicted RBP22.99■■□□□ 1.27
HMGA2-211ENST00000545998 DYDC2Q96IM9 177 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms