RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 IGF2BP3O00425 579 aaKnown RBP eCLIP12.65□□□□□ -0.39
TNC-213ENST00000544972 LYPLA2O95372 231 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 QARSP47897 775 aaKnown RBP12.65□□□□□ -0.39
TNC-213ENST00000544972 JAK3P52333 1124 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 PSMD2Q13200 908 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 UGCGQ16739 394 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 HSP90AA4PQ58FG1 418 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 CDKAL1Q5VV42 579 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 SEPT14Q6ZU15 432 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 C1orf186Q6ZWK4 172 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 GLIS3Q8NEA6 775 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 RDM1Q8NG50 284 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 DHTKD1Q96HY7 919 aaPredicted RBP12.65□□□□□ -0.39
TNC-213ENST00000544972 REEP2Q9BRK0 252 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 ZSWIM4Q9H7M6 989 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 IFNKQ9P0W0 207 aa12.65□□□□□ -0.39
TNC-213ENST00000544972 MCM3APO60318 1980 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 ADGRA2Q96PE1 1338 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 SLC10A3P09131 477 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 CDC25BP30305 580 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 TTI2Q6NXR4 508 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.64□□□□□ -0.39
TNC-213ENST00000544972 MORC4Q8TE76 937 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
TNC-213ENST00000544972 JPH1Q9HDC5 661 aaPredicted RBP12.64□□□□□ -0.39
TNC-213ENST00000544972 SLC9A2Q9UBY0 812 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 PCDHA10Q9Y5I2 948 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 TLL2Q9Y6L7 1015 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
TNC-213ENST00000544972 MANSC4A6NHS7 340 aaPredicted RBP12.63□□□□□ -0.39
TNC-213ENST00000544972 FAM155AB1AL88 458 aaPredicted RBP12.63□□□□□ -0.39
TNC-213ENST00000544972 RSPH10B2B2RC85 870 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 PSMA7O14818 248 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 KRT18P05783 430 aaKnown RBP12.63□□□□□ -0.39
TNC-213ENST00000544972 RSPH10BP0C881 870 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 PPP1R2P41236 205 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 PSMC5P62195 406 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 STIM1Q13586 685 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 FAM110CQ1W6H9 321 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 FAM26FQ5R3K3 315 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 APTXQ7Z2E3 356 aaKnown RBP12.63□□□□□ -0.39
TNC-213ENST00000544972 CCDC65Q8IXS2 484 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 C4orf19Q8IY42 314 aa12.63□□□□□ -0.39
TNC-213ENST00000544972 SMAP1Q8IYB5 467 aaPredicted RBP12.63□□□□□ -0.39
TNC-213ENST00000544972 GUF1Q8N442 669 aaKnown RBP12.63□□□□□ -0.39
TNC-213ENST00000544972 NAP1L5Q96NT1 182 aaPredicted RBP12.63□□□□□ -0.39
TNC-213ENST00000544972 UBA1P22314 1058 aaKnown RBP12.62□□□□□ -0.39
TNC-213ENST00000544972 CCNE1P24864 410 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 ACTR2P61160 394 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 ZNF792Q3KQV3 632 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 HS1BP3Q53T59 392 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 HERC4Q5GLZ8 1057 aaPredicted RBP12.62□□□□□ -0.39
TNC-213ENST00000544972 CENPPQ6IPU0 288 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 ABHD15Q6UXT9 468 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 EEPD1Q7L9B9 569 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 ABRAQ8N0Z2 381 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 SPC24Q8NBT2 197 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 P2RX5Q93086 422 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 DUSP9Q99956 384 aaKnown RBP12.62□□□□□ -0.39
TNC-213ENST00000544972 SEMA6BQ9H3T3 888 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 POLD4Q9HCU8 107 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 DBR1Q9UK59 544 aaKnown RBP12.62□□□□□ -0.39
TNC-213ENST00000544972 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 B4DLN1 442 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 STRNO43815 780 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 SORBS3O60504 671 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 STBD1O95210 358 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 ATG7O95352 703 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 ADORA2AP29274 412 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 YWHABP31946 246 aaKnown RBP12.62□□□□□ -0.39
TNC-213ENST00000544972 RARRES1P49788 294 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 UBASH3AP57075 661 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
TNC-213ENST00000544972 LRRC41Q15345 812 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 ANKRD40Q6AI12 368 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 CYFIP1Q7L576 1253 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 IRF2BP1Q8IU81 584 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 TRIM44Q96DX7 344 aaPredicted RBP12.62□□□□□ -0.39
TNC-213ENST00000544972 ZCCHC17Q9NP64 241 aaKnown RBP12.62□□□□□ -0.39
TNC-213ENST00000544972 INTS13Q9NVM9 706 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 KCND2Q9NZV8 630 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 TBC1D7Q9P0N9 293 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 TCEAL9Q9UHQ7 104 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 NRBP1Q9UHY1 535 aa12.62□□□□□ -0.39
TNC-213ENST00000544972 SYNGAP1Q96PV0 1343 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 TMEM150BA6NC51 233 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 ZNF862O60290 1169 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 ARIH2O95376 493 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 SERPINC1P01008 464 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 TGFB3P10600 412 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
TNC-213ENST00000544972 SP4Q02446 784 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 SFR1Q86XK3 245 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
TNC-213ENST00000544972 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 MPHOSPH6Q99547 160 aaKnown RBP12.61□□□□□ -0.39
TNC-213ENST00000544972 GABBR1Q9UBS5 961 aa12.61□□□□□ -0.39
TNC-213ENST00000544972 CPA4Q9UI42 421 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms