RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 MEIS2O14770 477 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 ZNF185O15231 689 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 NOL4O94818 638 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 PRPF6O94906 941 aaKnown RBP14.31□□□□□ -0.12
CPSF7-223ENST00000544669 EYA4O95677 639 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 PRKCIP41743 596 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 C2orf54Q08AI8 447 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 RAPGEF1Q13905 1077 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 GIT2Q14161 759 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 EXOC3L4Q17RC7 722 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 KIAA0753Q2KHM9 967 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 CATSPER3Q86XQ3 398 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 C1orf131Q8NDD1 294 aaKnown RBP14.31□□□□□ -0.12
CPSF7-223ENST00000544669 WHAMMQ8TF30 809 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPSF7-223ENST00000544669 COL2A1P02458 1487 aaPredicted RBP14.31□□□□□ -0.12
CPSF7-223ENST00000544669 A0A0A6YYK5 440 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-223ENST00000544669 GOLGA6CA6NDK9 693 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L15C9J2P7 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L13C9JLJ4 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L11C9JVI0 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L18D6R9N7 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L22D6RA61 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L17D6RBQ6 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L19D6RCP7 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L20D6RJB6 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 F5H6K3 240 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 GOLGA6DP0CG33 693 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 ZNF76P36508 570 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 NPEPPSP55786 919 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 KLRC3Q07444 240 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L24Q0WX57 530 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 PPP2R5EQ16537 467 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 ABCB5Q2M3G0 1257 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 PRR16Q569H4 304 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 RBM26Q5T8P6 1007 aaKnown RBP14.3□□□□□ -0.12
CPSF7-223ENST00000544669 MEI1Q5TIA1 1274 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 SYDE2Q5VT97 1194 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 EPM2AIP1Q7L775 607 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-223ENST00000544669 SMCR8Q8TEV9 937 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-223ENST00000544669 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 LRRC1Q9BTT6 524 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 GOLGA6AQ9NYA3 693 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 TFR2Q9UP52 801 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 DIS3Q9Y2L1 958 aaKnown RBP14.3□□□□□ -0.12
CPSF7-223ENST00000544669 UBR3Q6ZT12 1888 aa14.3□□□□□ -0.12
CPSF7-223ENST00000544669 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
CPSF7-223ENST00000544669 BMP3P12645 472 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 FERP16591 822 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 GRIPAP1Q4V328 841 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 GANQ9H2C0 597 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 GREB1LQ9C091 1923 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-223ENST00000544669 N4BP1O75113 896 aaKnown RBP14.29□□□□□ -0.12
CPSF7-223ENST00000544669 PPFIA4O75335 1185 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 MED24O75448 989 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 TRIM37O94972 964 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 RFX1P22670 979 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 GGCXP38435 758 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 SCNN1DP51172 638 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 SLC20A2Q08357 652 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 SPIRE1Q08AE8 756 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 MYBPC2Q14324 1141 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 RPS6KA1Q15418 735 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 CC2D2BQ6DHV5 1058 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 NFRKBQ6P4R8 1299 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 SND1Q7KZF4 910 aaKnown RBP eCLIP14.29□□□□□ -0.12
CPSF7-223ENST00000544669 MREGQ8N565 214 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 SUPT20HQ8NEM7 779 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 GDF3Q9NR23 364 aa14.29□□□□□ -0.12
CPSF7-223ENST00000544669 HERC5Q9UII4 1024 aaKnown RBP14.29□□□□□ -0.12
CPSF7-223ENST00000544669 CCDC188H7C350 402 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 PALMO75781 387 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 UCHL3P15374 230 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 IKQ13123 557 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-223ENST00000544669 ARSHQ5FYA8 562 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 DRC1Q96MC2 740 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 SH3GL2Q99962 352 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 WDR11Q9BZH6 1224 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-223ENST00000544669 ATRNL1Q5VV63 1379 aa14.28□□□□□ -0.12
CPSF7-223ENST00000544669 TLR2O60603 784 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 SHOX2O60902 331 aaPredicted RBP14.27□□□□□ -0.12
CPSF7-223ENST00000544669 PSMC2P35998 433 aaKnown RBP14.27□□□□□ -0.12
CPSF7-223ENST00000544669 RBM5P52756 815 aaKnown RBP eCLIP14.27□□□□□ -0.12
CPSF7-223ENST00000544669 CUL1Q13616 776 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 DOK7Q18PE1 504 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 STYK1Q6J9G0 422 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 HS2ST1Q7LGA3 356 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 NEK9Q8TD19 979 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 ACTRT1Q8TDG2 376 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 TBC1D7Q9P0N9 293 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 ADAMTS1Q9UHI8 967 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 ODF2LQ9ULJ1 636 aa14.27□□□□□ -0.12
CPSF7-223ENST00000544669 RAD21O60216 631 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms