RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 DCAF4Q8WV16 495 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 SKA2Q8WVK7 121 aaPredicted RBP13.86□□□□□ -0.19
CHD4-211ENST00000544484 TRIM11Q96F44 468 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 CFAP57Q96MR6 1250 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 NUF2Q9BZD4 464 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 ZWINTO95229 277 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 SLCO1A2P46721 670 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 SFR1Q86XK3 245 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 FAM84BQ96KN1 310 aaPredicted RBP13.85□□□□□ -0.19
CHD4-211ENST00000544484 LRRD1A4D1F6 860 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 FAM71BQ8TC56 605 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 MROH7-TTC4A0A0A0MT08 1334 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 ARHGAP31Q2M1Z3 1444 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 CHGBP05060 677 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 ZSCAN20P17040 1043 aaPredicted RBP13.85□□□□□ -0.19
CHD4-211ENST00000544484 ECE1P42892 770 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 BASP1P80723 227 aaKnown RBP13.85□□□□□ -0.19
CHD4-211ENST00000544484 ALKBH5Q6P6C2 394 aaKnown RBP13.85□□□□□ -0.19
CHD4-211ENST00000544484 PODNQ7Z5L7 613 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 ABCB11O95342 1321 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 NFX1Q12986 1120 aaKnown RBP13.85□□□□□ -0.19
CHD4-211ENST00000544484 MCUQ8NE86 351 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 HEXIM2Q96MH2 286 aaKnown RBP13.85□□□□□ -0.19
CHD4-211ENST00000544484 MED4Q9NPJ6 270 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 FNDC3AQ9Y2H6 1198 aaKnown RBP13.85□□□□□ -0.19
CHD4-211ENST00000544484 GLI2P10070 1586 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 POTEB3A0JP26 581 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 POTECB2RU33 542 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 POTEBQ6S5H4 581 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 EXOC8Q8IYI6 725 aa13.85□□□□□ -0.19
CHD4-211ENST00000544484 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 ECEL1O95672 775 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 AP3B2Q13367 1082 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 TSNAXIP1Q2TAA8 658 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 LRRC8CQ8TDW0 803 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 LRRC4Q9HBW1 653 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 ZNF233A6NK53 670 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 TSTA3Q13630 321 aaPredicted RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 ZKSCAN8Q15776 578 aaPredicted RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 UNC13DQ70J99 1090 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 CDKL2Q92772 493 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 FAM114A2Q9NRY5 505 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 TBK1Q9UHD2 729 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 PHLPP2Q6ZVD8 1323 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 NFIXQ14938 502 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 ZNF668Q96K58 619 aaPredicted RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 RPF1Q9H9Y2 349 aaKnown RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 MRPL47Q9HD33 250 aaKnown RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 INTS9Q9NV88 658 aaKnown RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 DNAJC17Q9NVM6 304 aaKnown RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 MFAP3LO75121 409 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 RASSF2P50749 326 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 LMNB2Q03252 620 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 SPP2Q13103 211 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 SNRNP48Q6IEG0 339 aaKnown RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 METTL23Q86XA0 190 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 KCTD6Q8NC69 237 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 JRKLQ9Y4A0 524 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 PRCPP42785 496 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 DHX9Q08211 1270 aaKnown RBP13.84□□□□□ -0.19
CHD4-211ENST00000544484 CDO1Q16878 200 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 RAPH1Q70E73 1250 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 DNAAF3Q8N9W5 541 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 ANAPC5Q9UJX4 755 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 LRFN2Q9ULH4 789 aa13.84□□□□□ -0.19
CHD4-211ENST00000544484 F5H6K3 240 aa13.83□□□□□ -0.19
CHD4-211ENST00000544484 ARHGAP4P98171 946 aa13.83□□□□□ -0.19
CHD4-211ENST00000544484 KLRC3Q07444 240 aa13.83□□□□□ -0.19
CHD4-211ENST00000544484 CCT5P48643 541 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 LIG3P49916 1009 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 DARS2Q6PI48 645 aaKnown RBP13.83□□□□□ -0.2
CHD4-211ENST00000544484 DYDC2Q96IM9 177 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 PANX2Q96RD6 677 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 MCF2LO15068 1137 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 STAT3P40763 770 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 CLNS1AP54105 237 aaKnown RBP13.83□□□□□ -0.2
CHD4-211ENST00000544484 EPHB4P54760 987 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 SH2D4BQ5SQS7 431 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 STAG2Q8N3U4 1231 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 TNS3Q68CZ2 1445 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 MYO1EQ12965 1108 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 PLCB4Q15147 1175 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 RUNDC3BQ96NL0 473 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 PARD6BQ9BYG5 372 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 RCSD1Q6JBY9 416 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 RNF10Q8N5U6 811 aaKnown RBP13.83□□□□□ -0.2
CHD4-211ENST00000544484 STK36Q9NRP7 1315 aa13.83□□□□□ -0.2
CHD4-211ENST00000544484 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 ZNF18P17022 549 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 GCLMP48507 274 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 PRPSAP1Q14558 356 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 QRICH1Q2TAL8 776 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms