RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ARMCX2Q7L311 632 aa33.93■■■■□ 3.02
CCM2-219ENST00000544363 SMYD4Q8IYR2 804 aaPredicted RBP33.93■■■■□ 3.02
CCM2-219ENST00000544363 GTPBP4Q9BZE4 634 aaKnown RBP33.93■■■■□ 3.02
CCM2-219ENST00000544363 PPP1R3GB7ZBB8 358 aa33.92■■■■□ 3.02
CCM2-219ENST00000544363 IKBKBO14920 756 aa33.92■■■■□ 3.02
CCM2-219ENST00000544363 LYPLA2O95372 231 aa33.92■■■■□ 3.02
CCM2-219ENST00000544363 UBA1P22314 1058 aaKnown RBP33.92■■■■□ 3.02
CCM2-219ENST00000544363 ARSHQ5FYA8 562 aa33.92■■■■□ 3.02
CCM2-219ENST00000544363 CYFIP1Q7L576 1253 aa33.92■■■■□ 3.02
CCM2-219ENST00000544363 ANP32BQ92688 251 aaKnown RBP33.92■■■■□ 3.02
CCM2-219ENST00000544363 DOCK5Q9H7D0 1870 aa33.91■■■■□ 3.02
CCM2-219ENST00000544363 CA12O43570 354 aa33.91■■■■□ 3.02
CCM2-219ENST00000544363 CD44P16070 742 aaKnown RBP33.91■■■■□ 3.02
CCM2-219ENST00000544363 ERCC5P28715 1186 aaPredicted RBP33.91■■■■□ 3.02
CCM2-219ENST00000544363 APLP1P51693 650 aa33.91■■■■□ 3.02
CCM2-219ENST00000544363 NEDD9Q14511 834 aa33.91■■■■□ 3.02
CCM2-219ENST00000544363 GDAQ9Y2T3 454 aa33.91■■■■□ 3.02
CCM2-219ENST00000544363 ZNF236Q9UL36 1845 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 ZBTB39O15060 712 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 ACTR2P61160 394 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 PSMC5P62195 406 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 FBXO16Q8IX29 292 aaPredicted RBP33.9■■■■□ 3.02
CCM2-219ENST00000544363 MCM3APO60318 1980 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 PSAPP07602 524 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 IDEP14735 1019 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 NCAPHQ15003 741 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 C4orf19Q8IY42 314 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 CAPNS2Q96L46 248 aa33.9■■■■□ 3.02
CCM2-219ENST00000544363 DDX41Q9UJV9 622 aaKnown RBP33.9■■■■□ 3.02
CCM2-219ENST00000544363 ALDH1A1P00352 501 aa33.89■■■■□ 3.02
CCM2-219ENST00000544363 KRT18P05783 430 aaKnown RBP33.89■■■■□ 3.02
CCM2-219ENST00000544363 MYL5Q02045 173 aa33.89■■■■□ 3.02
CCM2-219ENST00000544363 MORN1Q5T089 497 aa33.89■■■■□ 3.02
CCM2-219ENST00000544363 MAMDC4Q6UXC1 1216 aa33.89■■■■□ 3.02
CCM2-219ENST00000544363 ABHD15Q6UXT9 468 aa33.89■■■■□ 3.02
CCM2-219ENST00000544363 SLC5A4Q9NY91 659 aa33.89■■■■□ 3.02
CCM2-219ENST00000544363 SORBS3O60504 671 aa33.88■■■■□ 3.01
CCM2-219ENST00000544363 SP4Q02446 784 aa33.88■■■■□ 3.01
CCM2-219ENST00000544363 UGCGQ16739 394 aa33.88■■■■□ 3.01
CCM2-219ENST00000544363 MAML3Q96JK9 1138 aa33.88■■■■□ 3.01
CCM2-219ENST00000544363 TELO2Q9Y4R8 837 aa33.88■■■■□ 3.01
CCM2-219ENST00000544363 NPHP3-ACAD11A0A0J9YXS1 232 aa33.87■■■■□ 3.01
CCM2-219ENST00000544363 AOC2O75106 756 aa33.87■■■■□ 3.01
CCM2-219ENST00000544363 FARP2O94887 1054 aaPredicted RBP33.87■■■■□ 3.01
CCM2-219ENST00000544363 EHHADHQ08426 723 aa33.87■■■■□ 3.01
CCM2-219ENST00000544363 RINT1Q6NUQ1 792 aa33.87■■■■□ 3.01
CCM2-219ENST00000544363 MIS18BP1Q6P0N0 1132 aa33.87■■■■□ 3.01
CCM2-219ENST00000544363 CCDC65Q8IXS2 484 aa33.87■■■■□ 3.01
CCM2-219ENST00000544363 PANK4Q9NVE7 773 aa33.87■■■■□ 3.01
CCM2-219ENST00000544363 DBR1Q9UK59 544 aaKnown RBP33.87■■■■□ 3.01
CCM2-219ENST00000544363 LOXHD1Q8IVV2 1947 aa33.87■■■■□ 3.01
CCM2-219ENST00000544363 ATG7O95352 703 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 ARIH2O95376 493 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 PRCPP42785 496 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 PSMD2Q13200 908 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 GIT2Q14161 759 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 LY6KQ17RY6 165 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 KLHL10Q6JEL2 608 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 CCDC62Q6P9F0 684 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 REM2Q8IYK8 340 aaPredicted RBP33.86■■■■□ 3.01
CCM2-219ENST00000544363 ENOX1Q8TC92 643 aaKnown RBP33.86■■■■□ 3.01
CCM2-219ENST00000544363 RUSC1Q9BVN2 902 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 VTA1Q9NP79 307 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 DKC1O60832 514 aaKnown RBP eCLIP33.86■■■■□ 3.01
CCM2-219ENST00000544363 GGPS1O95749 300 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 SUPT20HL2P0C7V6 817 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 STK4Q13043 487 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 COASYQ13057 564 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 METTL7BQ6UX53 244 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 NPLOC4Q8TAT6 608 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 ATP6V0A1Q93050 837 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 CDKN2AIPQ9NXV6 580 aaPredicted RBP33.86■■■■□ 3.01
CCM2-219ENST00000544363 GABBR1Q9UBS5 961 aa33.86■■■■□ 3.01
CCM2-219ENST00000544363 FRMD3A2A2Y4 597 aa33.85■■■■□ 3.01
CCM2-219ENST00000544363 MAP2K5Q13163 448 aa33.85■■■■□ 3.01
CCM2-219ENST00000544363 SWSAP1Q6NVH7 229 aa33.85■■■■□ 3.01
CCM2-219ENST00000544363 C1orf186Q6ZWK4 172 aa33.85■■■■□ 3.01
CCM2-219ENST00000544363 ADSSL1Q8N142 457 aa33.85■■■■□ 3.01
CCM2-219ENST00000544363 SCFD2Q8WU76 684 aa33.85■■■■□ 3.01
CCM2-219ENST00000544363 KCND2Q9NZV8 630 aa33.85■■■■□ 3.01
CCM2-219ENST00000544363 SYNGAP1Q96PV0 1343 aa33.85■■■■□ 3.01
CCM2-219ENST00000544363 ARHGEF35A5YM69 484 aa33.84■■■■□ 3.01
CCM2-219ENST00000544363 YWHABP31946 246 aaKnown RBP33.84■■■■□ 3.01
CCM2-219ENST00000544363 TPM4P67936 248 aa33.84■■■■□ 3.01
CCM2-219ENST00000544363 RAD51AP2Q09MP3 1159 aa33.84■■■■□ 3.01
CCM2-219ENST00000544363 TTLL4Q14679 1199 aa33.84■■■■□ 3.01
CCM2-219ENST00000544363 COBLL1Q53SF7 1204 aa33.84■■■■□ 3.01
CCM2-219ENST00000544363 MED15Q96RN5 788 aa33.84■■■■□ 3.01
CCM2-219ENST00000544363 REEP2Q9BRK0 252 aa33.84■■■■□ 3.01
CCM2-219ENST00000544363 MLXIPQ9HAP2 919 aa33.84■■■■□ 3.01
CCM2-219ENST00000544363 ECM2O94769 699 aaPredicted RBP33.83■■■■□ 3.01
CCM2-219ENST00000544363 PLCB2Q00722 1185 aa33.83■■■■□ 3.01
CCM2-219ENST00000544363 CACNB1Q02641 598 aaPredicted RBP33.83■■■■□ 3.01
CCM2-219ENST00000544363 STIM1Q13586 685 aa33.83■■■■□ 3.01
CCM2-219ENST00000544363 CCDC60Q8IWA6 550 aaPredicted RBP33.83■■■■□ 3.01
CCM2-219ENST00000544363 MSL3Q8N5Y2 521 aaKnown RBP33.83■■■■□ 3.01
CCM2-219ENST00000544363 HPS3Q969F9 1004 aa33.83■■■■□ 3.01
CCM2-219ENST00000544363 TINF2Q9BSI4 451 aa33.83■■■■□ 3.01
CCM2-219ENST00000544363 PDGFCQ9NRA1 345 aa33.83■■■■□ 3.01
CCM2-219ENST00000544363 WDR81Q562E7 1941 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms