RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PTPAQ15257 358 aa16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CCDC60Q8IWA6 550 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ERAP1Q9NZ08 941 aa16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 YEATS4O95619 227 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 F2P00734 622 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PSEN2P49810 448 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MFSD10Q14728 455 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 EPHA7Q15375 998 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 IL17AQ16552 155 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 KIAA0753Q2KHM9 967 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PDXDC2PQ6P474 469 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CKAP2LQ8IYA6 745 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 BANK1Q8NDB2 785 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 KAT2BQ92831 832 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PCYT2Q99447 389 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 LRWD1Q9UFC0 647 aa16.27■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SCN10AQ9Y5Y9 1956 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 IGKV6D-21A0A0A0MT36 114 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SPTLC2O15270 562 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ATN1P54259 1190 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ITGA7Q13683 1181 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 PDIA5Q14554 519 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 PLPPR4Q7Z2D5 763 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 TRMT1LQ7Z2T5 733 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ERMNQ8TAM6 284 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 AFAP1L1Q8TED9 768 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ATP6V0A1Q93050 837 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CHAMP1Q96JM3 812 aa16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 EIF2AK1Q9BQI3 630 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-216ENST00000543995 COL6A1P12109 1028 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SLC26A2P50443 739 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CYP4A11Q02928 519 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 NBPF20Q3BBV1 942 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 FAM47CQ5HY64 1035 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 HAUS3Q68CZ6 603 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 C7orf31Q8N865 590 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 IGSF22Q8N9C0 903 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 PPP1R13LQ8WUF5 828 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 DYDC2Q96IM9 177 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 TRPC6Q9Y210 931 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 MAFBQ9Y5Q3 323 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 KAT6AQ92794 2004 aa16.25■□□□□ 0.19
TNFRSF1A-216ENST00000543995 DKC1O60832 514 aaKnown RBP eCLIP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 P4HBP07237 508 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 QARSP47897 775 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 PSMC5P62195 406 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 UGCGQ16739 394 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 TPH2Q8IWU9 490 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 KRI1Q8N9T8 703 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 NEK9Q8TD19 979 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 KCNG4Q8TDN1 519 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SPATA32Q96LK8 384 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 RNPEPQ9H4A4 650 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 RGL1Q9NZL6 768 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 FBXO2Q9UK22 296 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SRPRBQ9Y5M8 271 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 STK24Q9Y6E0 443 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 IGSF9BQ9UPX0 1349 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 POTEB3A0JP26 581 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 HAS3O00219 553 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 PPP6R2O75170 966 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 LONP1P36776 959 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ME1P48163 572 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 PRKCEQ02156 737 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 PLCB4Q15147 1175 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 KRT79Q5XKE5 535 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 POTEBQ6S5H4 581 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SLC39A5Q6ZMH5 540 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 TNPO1Q92973 898 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 AK8Q96MA6 479 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 LXNQ9BS40 222 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SCAND2PQ9GZW5 306 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CSRNP2Q9H175 543 aa16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 MORC2Q9Y6X9 1032 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-216ENST00000543995 PP2D1A8MPX8 630 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ARVCFO00192 962 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CAPN15O75808 1086 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SLITRK3O94933 977 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CDC25AP30304 524 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CCT6AP40227 531 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 GRIN1Q05586 938 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 NFRKBQ6P4R8 1299 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 UBE2Q1Q7Z7E8 422 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 FAM167AQ96KS9 214 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CLIC6Q96NY7 704 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ZSWIM4Q9H7M6 989 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 TUFT1Q9NNX1 390 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 HDAC6Q9UBN7 1215 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 GRIN2DO15399 1336 aa16.23■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ZNF862O60290 1169 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 HBP1O60381 514 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 OATP04181 439 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ATP4AP20648 1035 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms