RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	SYK	P43405	635 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	QARS	P47897	775 aa	Known RBP	13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	PSMC5	P62195	406 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	HSDL1	Q3SXM5	330 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	RRAGB	Q5VZM2	374 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	TPH2	Q8IWU9	490 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	CEP57L1	Q8IYX8	460 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	PDILT	Q8N807	584 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	BANK1	Q8NDB2	785 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	AFG1L	Q8WV93	481 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	GLG1	Q92896	1179 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	LENG1	Q96BZ8	264 aa	Predicted RBP	13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	LXN	Q9BS40	222 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	LMBRD1	Q9NUN5	540 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	GABBR1	Q9UBS5	961 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	KCNH3	Q9ULD8	1083 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	SYNRG	Q9UMZ2	1314 aa		13.32	□□□□□ -0.28
DDB1-223	ENST00000543658	POTEB3	A0JP26	581 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	ADCY6	O43306	1168 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	KIN	O60870	393 aa	Known RBP	13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	MYC	P01106	439 aa	Predicted RBP	13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	GJA9	P57773	515 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	CTTN	Q14247	550 aa	Known RBP	13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	KARS	Q15046	597 aa	Known RBP	13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	TMEM63B	Q5T3F8	832 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	SWSAP1	Q6NVH7	229 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	PDXDC2P	Q6P474	469 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	POTEB	Q6S5H4	581 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	B3GNT9	Q6UX72	402 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	ABHD15	Q6UXT9	468 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	RNF180	Q86T96	592 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	IQUB	Q8NA54	791 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	DHX58	Q96C10	678 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	PLIN2	Q99541	437 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	RNF208	Q9H0X6	261 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	SMARCAD1	Q9H4L7	1026 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	BCAS3	Q9H6U6	928 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	ZSWIM4	Q9H7M6	989 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	DDX19A	Q9NUU7	478 aa	Known RBP	13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	STK17A	Q9UEE5	414 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	KIAA1024	Q9UPX6	916 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	EMSY	Q7Z589	1322 aa		13.31	□□□□□ -0.28
DDB1-223	ENST00000543658	GSTTP1	A0A1W2PQM5	241 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	POTEF	A5A3E0	1075 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	POLR2D	O15514	142 aa	Known RBP	13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	KPNA6	O60684	536 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	PPFIA4	O75335	1185 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	MED24	O75448	989 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	ATG7	O95352	703 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	MYL3	P08590	195 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	CCL5	P13501	91 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	PLCG1	P19174	1290 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	STAT5B	P51692	787 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	NDUFA8	P51970	172 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	FAM160A1	Q05DH4	1040 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	NFKBIB	Q15653	356 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	FSCN1	Q16658	493 aa	Known RBP	13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	GNAS	Q5JWF2	1037 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	POTEG	Q6S5H5	508 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	USP49	Q70CQ1	688 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	CATSPER3	Q86XQ3	398 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	KCTD17	Q8N5Z5	321 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	PCSK9	Q8NBP7	692 aa	Known RBP	13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	FAM167A	Q96KS9	214 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	KATNAL1	Q9BW62	490 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	PANK2	Q9BZ23	570 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	UNC93B1	Q9H1C4	597 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	UPF3A	Q9H1J1	476 aa	Known RBP	13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	RGL1	Q9NZL6	768 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	USP25	Q9UHP3	1055 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	HOOK1	Q9UJC3	728 aa	Known RBP	13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	IGSF9B	Q9UPX0	1349 aa		13.3	□□□□□ -0.28
DDB1-223	ENST00000543658	KBTBD13	C9JR72	458 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	PGK1	P00558	417 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	LGALS2	P05162	132 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	ZNF286B	P0CG31	522 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	PTGS1	P23219	599 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	SLC26A2	P50443	739 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	BEX3	Q00994	111 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	PRKCE	Q02156	737 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	HYI	Q5T013	277 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	OTUD6A	Q7L8S5	288 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	C4orf19	Q8IY42	314 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	CNNM3	Q8NE01	707 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	AFAP1L1	Q8TED9	768 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	SYAP1	Q96A49	352 aa	Predicted RBP	13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	NACC1	Q96RE7	527 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	MMTAG2	Q9BU76	263 aa	Known RBP	13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	CUEDC2	Q9H467	287 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	GOLPH3L	Q9H4A5	285 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	MAGEF1	Q9HAY2	307 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	ERAP1	Q9NZ08	941 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	DNM3	Q9UQ16	869 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658	TRPC6	Q9Y210	931 aa		13.29	□□□□□ -0.28
DDB1-223	ENST00000543658		A6NJR5	290 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms