RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
COPS7A-217ENST00000543537 STXBP5LQ9Y2K9 1186 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 PCDHB6Q9Y5E3 794 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
COPS7A-217ENST00000543537 FRMPD4Q14CM0 1322 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 B4GALT4O60513 344 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 CFBP00751 764 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 HOXD8P13378 290 aaPredicted RBP12.91□□□□□ -0.34
COPS7A-217ENST00000543537 MARCKSP29966 332 aaPredicted RBP12.91□□□□□ -0.34
COPS7A-217ENST00000543537 NDUFA8P51970 172 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 TYRO3Q06418 890 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 PTGDRQ13258 359 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 TMEM266Q2M3C6 531 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 TMEM240Q5SV17 173 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 ARHGEF16Q5VV41 709 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 C16orf59Q7L2K0 433 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 TMEM199Q8N511 208 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 CNNM3Q8NE01 707 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 BPIFA3Q9BQP9 254 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 FUCA2Q9BTY2 467 aa12.91□□□□□ -0.34
COPS7A-217ENST00000543537 NOC4LQ9BVI4 516 aaKnown RBP12.91□□□□□ -0.34
COPS7A-217ENST00000543537 DDX41Q9UJV9 622 aaKnown RBP12.91□□□□□ -0.34
COPS7A-217ENST00000543537 KIAA1217Q5T5P2 1943 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 A0A1B0GVL5 298 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 PIK3CDO00329 1044 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 TBX3O15119 743 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 RGS20O76081 388 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 GH1P01241 217 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 TPM3P06753 285 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 SLFN14P0C7P3 912 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 TGFB3P10600 412 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 CSF2RAP15509 400 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 ARHGAP1Q07960 439 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 PSRC1Q6PGN9 363 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-217ENST00000543537 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 SHC4Q6S5L8 630 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 Q7L0L9 218 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 GAS2L3Q86XJ1 694 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 COPS5Q92905 334 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
COPS7A-217ENST00000543537 RNPC3Q96LT9 517 aaKnown RBP12.9□□□□□ -0.34
COPS7A-217ENST00000543537 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.9□□□□□ -0.34
COPS7A-217ENST00000543537 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
COPS7A-217ENST00000543537 hCG_1642624A0A1W2PR95 340 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 GOLGA6L19H0YKK7 550 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 GCOM1H8Y6P7 765 aaPredicted RBP12.89□□□□□ -0.35
COPS7A-217ENST00000543537 NEMFO60524 1076 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 DTNBO60941 627 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 POLR2MP0CAP2 368 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
COPS7A-217ENST00000543537 UBA7P41226 1012 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 PPP1R2P41236 205 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 PSMC6P62333 389 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 AMPD3Q01432 767 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 PGM5Q15124 567 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 ZNF174Q15697 407 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 SLFN12Q8IYM2 578 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 PPTC7Q8NI37 304 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 CCDC47Q96A33 483 aaKnown RBP12.89□□□□□ -0.35
COPS7A-217ENST00000543537 TRIM44Q96DX7 344 aaPredicted RBP12.89□□□□□ -0.35
COPS7A-217ENST00000543537 FTOQ9C0B1 505 aaKnown RBP eCLIP12.89□□□□□ -0.35
COPS7A-217ENST00000543537 CCSER1Q9C0I3 900 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 IL23AQ9NPF7 189 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 TCHHQ07283 1943 aa12.89□□□□□ -0.35
COPS7A-217ENST00000543537 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-217ENST00000543537 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-217ENST00000543537 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 BECN2A8MW95 431 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 STAM2O75886 525 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 MMP3P08254 477 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 OR52Z1P0C646 297 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 CYP2C18P33260 490 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 CLK2P49760 499 aaKnown RBP12.88□□□□□ -0.35
COPS7A-217ENST00000543537 ZNF165P49910 485 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 CAMK4Q16566 473 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 LY6KQ17RY6 165 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 SEPT14Q6ZU15 432 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 MLKLQ8NB16 471 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 PIBF1Q8WXW3 757 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 HERVK_113Q902F9 699 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 VWCEQ96DN2 955 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 GUCD1Q96NT3 240 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 GSDMAQ96QA5 445 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 PPP1R9BQ96SB3 815 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 RBSNQ9H1K0 784 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms