RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 YIPF3Q9GZM5 350 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 SSX2IPQ9Y2D8 614 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 MAPK13O15264 365 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 PDE1CQ14123 709 aaPredicted RBP20.94■□□□□ 0.94
SUDS3-204ENST00000543473 HSP90AA5PQ58FG0 334 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 TMC4Q7Z404 712 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 PIGSQ96S52 555 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 ZNF408Q9H9D4 720 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.94■□□□□ 0.94
SUDS3-204ENST00000543473 IQSEC2Q5JU85 1478 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 GRID2IPA4D2P6 1211 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 TCP10L2B9ZVM9 353 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 PODXLO00592 558 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 DLATP10515 647 aaKnown RBP20.94■□□□□ 0.94
SUDS3-204ENST00000543473 SGMS1Q86VZ5 419 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 DBNDD1Q9H9R9 158 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 INHBAP08476 426 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 CA4P22748 312 aa20.94■□□□□ 0.94
SUDS3-204ENST00000543473 MDH1P40925 334 aaKnown RBP20.94■□□□□ 0.94
SUDS3-204ENST00000543473 EXOC1LA0A1B0GW35 172 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 MFAP3P55082 362 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 GRAPQ13588 217 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 FAM83BQ5T0W9 1011 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 GRAPLQ8TC17 118 aaPredicted RBP20.93■□□□□ 0.94
SUDS3-204ENST00000543473 COL15A1P39059 1388 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 H0Y3Z8 333 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 MMP10P09238 476 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 TRIP13Q15645 432 aaPredicted RBP20.93■□□□□ 0.94
SUDS3-204ENST00000543473 HADHQ16836 314 aaKnown RBP20.93■□□□□ 0.94
SUDS3-204ENST00000543473 BSPRYQ5W0U4 402 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 DNAJC17Q9NVM6 304 aaKnown RBP20.93■□□□□ 0.94
SUDS3-204ENST00000543473 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.93■□□□□ 0.94
SUDS3-204ENST00000543473 YWHAGP61981 247 aaKnown RBP eCLIP20.93■□□□□ 0.94
SUDS3-204ENST00000543473 ZNF473Q8WTR7 871 aaKnown RBP20.93■□□□□ 0.94
SUDS3-204ENST00000543473 ISCA1Q9BUE6 129 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 PTK2Q05397 1052 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 DRP2Q13474 957 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 AFAP1L2Q8N4X5 818 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 RUBCNQ92622 972 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 TUBB6Q9BUF5 446 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 TRIM10Q9UDY6 481 aa20.93■□□□□ 0.94
SUDS3-204ENST00000543473 MAP3K7O43318 606 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 PLA2G4BP0C869 781 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 SPDL1Q96EA4 605 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 PACSIN2Q9UNF0 486 aaPredicted RBP20.92■□□□□ 0.94
SUDS3-204ENST00000543473 FAF1Q9UNN5 650 aaPredicted RBP20.92■□□□□ 0.94
SUDS3-204ENST00000543473 TECPR2O15040 1411 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 ITIH6Q6UXX5 1313 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 AOC3Q16853 763 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 HOOK2Q96ED9 719 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 POLD4Q9HCU8 107 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.92■□□□□ 0.94
SUDS3-204ENST00000543473 OVOS2A0A0G2JMS6 1433 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 PABPN1LA6NDY0 278 aaKnown RBP20.92■□□□□ 0.94
SUDS3-204ENST00000543473 CHGBP05060 677 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 RCAN1P53805 252 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 DIXDC1Q155Q3 683 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 CERKLQ49MI3 558 aaPredicted RBP20.92■□□□□ 0.94
SUDS3-204ENST00000543473 NSMFQ6X4W1 530 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 NT5C1BQ96P26 610 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 DDX23Q9BUQ8 820 aaKnown RBP20.92■□□□□ 0.94
SUDS3-204ENST00000543473 GAP43P17677 238 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 FBXO11Q86XK2 927 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 COA7Q96BR5 231 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 DDX27Q96GQ7 796 aaKnown RBP20.92■□□□□ 0.94
SUDS3-204ENST00000543473 FBXL5Q9UKA1 691 aa20.92■□□□□ 0.94
SUDS3-204ENST00000543473 FAM102BQ5T8I3 360 aa20.91■□□□□ 0.94
SUDS3-204ENST00000543473 FAM47EQ6ZV65 393 aa20.91■□□□□ 0.94
SUDS3-204ENST00000543473 TNFAIP1Q13829 316 aa20.91■□□□□ 0.94
SUDS3-204ENST00000543473 ASPRV1Q53RT3 343 aa20.91■□□□□ 0.94
SUDS3-204ENST00000543473 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
SUDS3-204ENST00000543473 THOC1Q96FV9 657 aaKnown RBP20.91■□□□□ 0.94
SUDS3-204ENST00000543473 FDPSP14324 419 aaKnown RBP20.91■□□□□ 0.94
SUDS3-204ENST00000543473 USP17L2Q6R6M4 530 aa20.91■□□□□ 0.94
SUDS3-204ENST00000543473 PNKPQ96T60 521 aa20.91■□□□□ 0.94
SUDS3-204ENST00000543473 CFAP73A6NFT4 308 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 CTDNEP1O95476 244 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 FOSP01100 380 aaPredicted RBP20.9■□□□□ 0.94
SUDS3-204ENST00000543473 PFKFB3Q16875 520 aaPredicted RBP20.9■□□□□ 0.94
SUDS3-204ENST00000543473 LRRC23Q53EV4 343 aaPredicted RBP20.9■□□□□ 0.94
SUDS3-204ENST00000543473 GJD4Q96KN9 370 aaPredicted RBP20.9■□□□□ 0.94
SUDS3-204ENST00000543473 FAM167BQ9BTA0 163 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 MTA3Q9BTC8 594 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 DIS3Q9Y2L1 958 aaKnown RBP20.9■□□□□ 0.94
SUDS3-204ENST00000543473 KIAA1210Q9ULL0 1709 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 RHOT2Q8IXI1 618 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 PROM2Q8N271 834 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 AZI2Q9H6S1 392 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 ZNF609O15014 1411 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 SGK1O00141 431 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 MEIS1O00470 390 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 DAPK3O43293 454 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 ESRRAP11474 423 aaPredicted RBP20.9■□□□□ 0.94
SUDS3-204ENST00000543473 GUCY1A2P33402 732 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 PMS2P54278 862 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 GPR101Q96P66 508 aaPredicted RBP20.9■□□□□ 0.94
SUDS3-204ENST00000543473 SH3GLB2Q9NR46 395 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 ARMC2Q8NEN0 867 aa20.9■□□□□ 0.94
SUDS3-204ENST00000543473 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.9■□□□□ 0.943e-6■□□□□ 8.9
SUDS3-204ENST00000543473 UBE2TQ9NPD8 197 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms