RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 RIT2Q99578 217 aa11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 BCAS3Q9H6U6 928 aa11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 UPF2Q9HAU5 1272 aaKnown RBP11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 SETD4Q9NVD3 440 aa11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 TUBE1Q9UJT0 475 aa11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 TPCN1Q9ULQ1 816 aa11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 TRPC6Q9Y210 931 aa11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 COL1A2P08123 1366 aa11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 TANC1Q9C0D5 1861 aa11.66□□□□□ -0.54
NPIPB4-217ENST00000543449 IGKV6D-21A0A0A0MT36 114 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 CCDC194A0A1B0GVG4 234 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 GCFC2P16383 781 aaKnown RBP11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 SFNP31947 248 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 ZNF200P98182 395 aaPredicted RBP11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 ITGB3BPQ13352 177 aaPredicted RBP11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 Q4G0T1 1027 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 PRR16Q569H4 304 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 IER5Q5VY09 327 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 NME8Q8N427 588 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 RDM1Q8NG50 284 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 PPP1R13LQ8WUF5 828 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 FAM167AQ96KS9 214 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 GAS2L1Q99501 681 aaPredicted RBP11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 ZNF302Q9NR11 478 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 CEP131Q9UPN4 1083 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 PCDHA10Q9Y5I2 948 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 SQORQ9Y6N5 450 aa11.65□□□□□ -0.54
NPIPB4-217ENST00000543449 CYP3A7-CYP3A51PA0A087WV96 503 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 POTEB3A0JP26 581 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 WDR64B1ANS9 1081 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 NBNO60934 754 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 AMHP03971 560 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 FOSL2P15408 326 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 CYP3A7P24462 503 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 MARK3P27448 753 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 JAK3P52333 1124 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 TRIM29Q14134 588 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 ZNF484Q5JVG2 852 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 ODR4Q5SWX8 454 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 PDXDC2PQ6P474 469 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 POTEBQ6S5H4 581 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 ABHD15Q6UXT9 468 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 USP38Q8NB14 1042 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 TBCKQ8TEA7 893 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 ATP8B4Q8TF62 1192 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 GTF3C6Q969F1 213 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 ZSCAN31Q96LW9 406 aaPredicted RBP11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 FAM161BQ96MY7 647 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 GUCD1Q96NT3 240 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 CDX2Q99626 313 aaPredicted RBP11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 PHF20Q9BVI0 1012 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 TEKT3Q9BXF9 490 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 TTYH1Q9H313 450 aaPredicted RBP11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 ORC3Q9UBD5 711 aaPredicted RBP11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 PCDHA2Q9Y5H9 948 aa11.64□□□□□ -0.55
NPIPB4-217ENST00000543449 DDX39AO00148 427 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 DHX15O43143 795 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 GAS7O60861 476 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 INSRRP14616 1297 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 WDR5P61964 334 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 HIC1Q14526 733 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 PLCB4Q15147 1175 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 PLEKHG4Q58EX7 1191 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 TRAF7Q6Q0C0 670 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 HERC6Q8IVU3 1022 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 RASGRP4Q8TDF6 673 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 VWCEQ96DN2 955 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 PCYT2Q99447 389 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 LIMCH1Q9UPQ0 1083 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 SAMM50Q9Y512 469 aa11.63□□□□□ -0.55
NPIPB4-217ENST00000543449 SMIM35A0A1B0GVV1 85 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 GRXCR1A8MXD5 290 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 M0R2N6 131 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 TBX3O15119 743 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 TLL1O43897 1013 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 DKC1O60832 514 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 PPFIA3O75145 1194 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 CCNE2O96020 404 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 LRCH2Q5VUJ6 765 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 PPP4R3AQ6IN85 833 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 SWSAP1Q6NVH7 229 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 NEK8Q86SG6 692 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 CKAP2LQ8IYA6 745 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 DBF4BQ8NFT6 615 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 SLC5A5Q92911 643 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 WNT8BQ93098 351 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 FAM20AQ96MK3 541 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 LLPHQ9BRT6 129 aaKnown RBP11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 NKX2-4Q9H2Z4 354 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 SH2B1Q9NRF2 756 aaPredicted RBP11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 NRBP2Q9NSY0 501 aa11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 MAFBQ9Y5Q3 323 aaPredicted RBP11.62□□□□□ -0.55
NPIPB4-217ENST00000543449 MSH4O15457 936 aa11.61□□□□□ -0.55
NPIPB4-217ENST00000543449 MAGEB2O15479 319 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms