RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PSPC1Q8WXF1 523 aaKnown RBP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 MSTO1Q9BUK6 570 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 TUBB2BQ9BVA1 445 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 RBSNQ9H1K0 784 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 ATP6V0A4Q9HBG4 840 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 EMILIN3Q9NT22 766 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 SLC12A6Q9UHW9 1150 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 DDIT3P35638 169 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 MXI1P50539 228 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 GTF2A1P52655 376 aaPredicted RBP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 ARHGAP4P98171 946 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 CFAP221Q4G0U5 840 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 LGSNQ5TDP6 509 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 THNSL1Q8IYQ7 743 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 FAM151AQ8WW52 585 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 AIFM3Q96NN9 605 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 MYOZ2Q9NPC6 264 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 FAM184BQ9ULE4 1060 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 PHLPP2Q6ZVD8 1323 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 LRRC7Q96NW7 1537 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 GSG1L2A8MUP6 293 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 PLCG1P19174 1290 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 PFKFB3Q16875 520 aaPredicted RBP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 COL23A1Q86Y22 540 aaPredicted RBP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 KLHL7Q8IXQ5 586 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 TTC30BQ8N4P2 665 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 P2RX5Q93086 422 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 TUBGCP2Q9BSJ2 902 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 INTUQ9ULD6 942 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 POLIQ9UNA4 740 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 THAP12O43422 761 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 SFNP31947 248 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 SRGAP1Q7Z6B7 1085 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 UBE2Q1Q7Z7E8 422 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 AGBL3Q8NEM8 1001 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 FAM20AQ96MK3 541 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 CEP63Q96MT8 703 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 SPATA33Q96N06 139 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 DEFB129Q9H1M3 183 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 PRDM5Q9NQX1 630 aaPredicted RBP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 FANCLQ9NW38 375 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 CCL15-CCL14A0A0B4J2E2 113 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 WDR46O15213 610 aaKnown RBP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 AFPP02771 609 aaKnown RBP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 PRELPP51888 382 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 CCL15Q16663 113 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 C12orf60Q5U649 245 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 SAMD7Q7Z3H4 446 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 IFT122Q9HBG6 1241 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 ZNF302Q9NR11 478 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 RFX7Q2KHR2 1363 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 MYO1FO00160 1098 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 ORC4O43929 436 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 LDHAP00338 332 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 ECE1P42892 770 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 RCAN1P53805 252 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 ADKP55263 362 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 SREBF2Q12772 1141 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 GRM4Q14833 912 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 LDHDQ86WU2 507 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 SIX6OS1Q8N1H7 587 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 PMM1Q92871 262 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 AFG3L2Q9Y4W6 797 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 PCDHB6Q9Y5E3 794 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 TGFB2P61812 414 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 CBX1P83916 185 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 PPP2R5CQ13362 524 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 KCNV1Q6PIU1 500 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 C4orf50Q6ZRC1 276 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 LINC00301Q8NCQ3 95 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 NEK9Q8TD19 979 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 FLT1P17948 1338 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 PFDN6O15212 129 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 CLDN3O15551 220 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 MED7O43513 233 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 CETPP11597 493 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 GYS1P13807 737 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 MYBPC2Q14324 1141 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 PLCB4Q15147 1175 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 LONRF2Q1L5Z9 754 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 PRAMEF18Q5VWM3 479 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 PIGOQ8TEQ8 1089 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 RNF139Q8WU17 664 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 GTF3C2Q8WUA4 911 aaPredicted RBP7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 DIS3Q9Y2L1 958 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 SRPRBQ9Y5M8 271 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 BZW2Q9Y6E2 419 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 KDM4FA0A1W2PPD8 638 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 KBTBD13C9JR72 458 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 ATP2C2O75185 946 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 EEF1GP26641 437 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 SKIV2LQ15477 1246 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 CDC42EP5Q6NZY7 148 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 ATG9AQ7Z3C6 839 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 IFT20Q8IY31 132 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 ADGRF4Q8IZF3 695 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 ANKS4BQ8N8V4 417 aa7.48□□□□□ -1.21
SRGAP1-206ENST00000543397 TRIM58Q8NG06 486 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms