RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 CIITAP33076 1130 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 TAP1Q03518 808 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PPFIA1Q13136 1202 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 GRIK4Q16099 956 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PPP2R2DQ66LE6 453 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ABHD15Q6UXT9 468 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CCDC12Q8WUD4 166 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 LENG9Q96B70 501 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 SH3GLB2Q9NR46 395 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 VPS54Q9P1Q0 977 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 MICAL3Q7RTP6 2002 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PRRC2BQ5JSZ5 2229 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 LCHNA4D1U4 455 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 M0R2N6 131 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 INSRRP14616 1297 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 KCNJ6P48051 423 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 IKBKEQ14164 716 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PLCB4Q15147 1175 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 NPY5RQ15761 445 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 MCTP2Q6DN12 878 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PLPPR4Q7Z2D5 763 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PLA2G4DQ86XP0 818 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 GLG1Q92896 1179 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 SDF4Q9BRK5 362 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PDRG1Q9NUG6 133 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 SIP14410 1827 aa14.93□□□□□ -0.02
TNFRSF1A-215ENST00000543359 EPOPA6NHQ4 379 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 EFCAB14O75071 495 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 GJB5O95377 273 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CTSHP09668 335 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ZNF76P36508 570 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ANAPC15P60006 121 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 AKAP17AQ02040 695 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 MGAT3Q09327 533 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 TAF2Q6P1X5 1199 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 SPRED2Q7Z698 418 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ZBTB10Q96DT7 871 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 TPCN1Q9ULQ1 816 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 NCOR1O75376 2440 aa14.92□□□□□ -0.02
TNFRSF1A-215ENST00000543359 IPO5O00410 1097 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 POU3F3P20264 500 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ATP4AP20648 1035 aa14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 STAT5BP51692 787 aa14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 SSRP1Q08945 709 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 SCRN1Q12765 414 aa14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CCDC148Q8NFR7 591 aa14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 BICD2Q8TD16 824 aa14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 AIFM3Q96NN9 605 aa14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 UIMC1Q96RL1 719 aa14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 GAS2L1Q99501 681 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 TUBE1Q9UJT0 475 aa14.91□□□□□ -0.02
TNFRSF1A-215ENST00000543359 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 RRN3P2A6NIE6 340 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ZBTB42B2RXF5 422 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 KIF28PB7ZC32 967 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 DDX39AO00148 427 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 RFXAPO00287 272 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 TLL1O43897 1013 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 LPXNO60711 386 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PFKFB2O60825 505 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 DEXIO95424 95 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 SEC24BO95487 1268 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 USP11P51784 963 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 STK3Q13188 491 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 TRAPPC12Q8WVT3 735 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 DNAJB3Q8WWF6 145 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 RAD9AQ99638 391 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ZNF577Q9BSK1 485 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 AZI2Q9H6S1 392 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CERS4Q9HA82 394 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 TBC1D22BQ9NU19 505 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PCDHA2Q9Y5H9 948 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 WDR81Q562E7 1941 aa14.9□□□□□ -0.02
TNFRSF1A-215ENST00000543359 DLL1O00548 723 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CTDNEP1O95476 244 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SLC26A2P50443 739 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 HTRA4P83105 476 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SETQ01105 290 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 LPIN1Q14693 890 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 PRR16Q569H4 304 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ZNF746Q6NUN9 644 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TRIM22Q8IYM9 498 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 FAM177A1Q8N128 213 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 DAGLBQ8NCG7 672 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SEPT8Q92599 483 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 PRDM6Q9NQX0 595 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 PCDHA4Q9UN74 947 aa14.89□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CYP3A7-CYP3A51PA0A087WV96 503 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 POTEB3A0JP26 581 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CPLX1O14810 134 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MSH4O15457 936 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 DTNBO60941 627 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CYP3A7P24462 503 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 NLRP5P59047 1200 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 IGBP1P78318 339 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 FBXO47Q5MNV8 452 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms