RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 DPYDQ12882 1025 aa11.11□□□□□ -0.63
TOP3A-208ENST00000542570 MAN2A1Q16706 1144 aa11.11□□□□□ -0.63
TOP3A-208ENST00000542570 EPC1Q9H2F5 836 aa11.11□□□□□ -0.63
TOP3A-208ENST00000542570 RABEP2Q9H5N1 569 aa11.11□□□□□ -0.63
TOP3A-208ENST00000542570 RIOX1Q9H6W3 641 aa11.11□□□□□ -0.63
TOP3A-208ENST00000542570 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 WDR64B1ANS9 1081 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 RGL2O15211 777 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 HIP1RO75146 1068 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 VPS41P49754 854 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 BACE1P56817 501 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 CNTN2Q02246 1040 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 MIS18BP1Q6P0N0 1132 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 RHPN2Q8IUC4 686 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 NLRP7Q8WX94 980 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 CLMNQ96JQ2 1002 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 CHP1Q99653 195 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 FAM213AQ9BRX8 229 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 NUP58Q9BVL2 599 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 GOLGA6L10A6NI86 522 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 FAM86B1E9PN63 330 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 NEBLO76041 1014 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 PSAPP07602 524 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 FAM86B2P0C5J1 330 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 TMOD1P28289 359 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 IFFO1Q0D2I5 559 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 MCTP2Q6DN12 878 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-208ENST00000542570 KCNK18Q7Z418 384 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 ZBTB8OSQ8IWT0 167 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 SCYL3Q8IZE3 742 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 LRRC71Q8N4P6 559 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 HYOU1Q9Y4L1 999 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 TXNP10599 105 aaKnown RBP11.1□□□□□ -0.63
TOP3A-208ENST00000542570 ACTN1P12814 892 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 PSMC2P35998 433 aaKnown RBP11.1□□□□□ -0.63
TOP3A-208ENST00000542570 MB21D1Q8N884 522 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 EHBP1Q8NDI1 1231 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 GLIS3Q8NEA6 775 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 SPATA33Q96N06 139 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 IDI2Q9BXS1 227 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 CCSER1Q9C0I3 900 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 RRAGCQ9HB90 399 aa11.1□□□□□ -0.63
TOP3A-208ENST00000542570 CCL15-CCL14A0A0B4J2E2 113 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 FTCDO95954 541 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-208ENST00000542570 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 CCL15Q16663 113 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 MAP7D2Q96T17 732 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 BEGAINQ9BUH8 593 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 NR3C1P04150 777 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 P4HBP07237 508 aaKnown RBP11.09□□□□□ -0.63
TOP3A-208ENST00000542570 TMEM191BP0C7N4 346 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 DNAAF5Q86Y56 855 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 KCNF1Q9H3M0 494 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 ARFGAP3Q9NP61 516 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 SYNJ2BP-COX16A0A087WUM0 186 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 ANKRD62A6NC57 917 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 DYNC1I1O14576 645 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 AFPP02771 609 aaKnown RBP11.09□□□□□ -0.63
TOP3A-208ENST00000542570 EEF1GP26641 437 aaKnown RBP11.09□□□□□ -0.63
TOP3A-208ENST00000542570 FXR1P51114 621 aaKnown RBP eCLIP11.09□□□□□ -0.63
TOP3A-208ENST00000542570 GRB10Q13322 594 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 TRIM14Q14142 442 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 VWA3BQ502W6 1294 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 GSTA5Q7RTV2 222 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 DAAM2Q86T65 1068 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 MMP19Q99542 508 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 COX16Q9P0S2 106 aa11.09□□□□□ -0.63
TOP3A-208ENST00000542570 DYNC1LI2O43237 492 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-208ENST00000542570 SRGAP2O75044 1071 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 BCRP11274 1271 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 ACOT2P49753 483 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 MYL7Q01449 175 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 LPAR1Q92633 364 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 SYT17Q9BSW7 474 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 CHORDC1Q9UHD1 332 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-208ENST00000542570 IQCA1LA6NCM1 817 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 KCNK3O14649 394 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 STX10O60499 249 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 YWHABP31946 246 aaKnown RBP11.08□□□□□ -0.64
TOP3A-208ENST00000542570 TAF1CQ15572 869 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-208ENST00000542570 DCUN1D2Q6PH85 259 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 ZNF354CQ86Y25 554 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 C7orf31Q8N865 590 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 GOLGA1Q92805 767 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 NOX5Q96PH1 765 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 PCDHA10Q9Y5I2 948 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 MYO9BQ13459 2157 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 PMS1P54277 932 aaKnown RBP11.08□□□□□ -0.64
TOP3A-208ENST00000542570 FAM160B1Q5W0V3 765 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 PEX26Q7Z412 305 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 ACCSQ96QU6 501 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 PARP2Q9UGN5 583 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 LMO7Q8WWI1 1683 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 LRP6O75581 1613 aa11.08□□□□□ -0.64
TOP3A-208ENST00000542570 IRF6O14896 467 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms