RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 TCEAL9Q9UHQ7 104 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 SLC34A2O95436 690 aa22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 TDP2O95551 362 aa22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 MMP1P03956 469 aa22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 SMAD3P84022 425 aaKnown RBP22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 PPFIA1Q13136 1202 aa22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 FAM160B1Q5W0V3 765 aa22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 DEFB128Q7Z7B8 93 aa22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 NEK8Q86SG6 692 aa22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 SMAP1Q8IYB5 467 aaPredicted RBP22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 SLC5A5Q92911 643 aa22.74■■□□□ 1.23
CACNA2D4-215ENST00000542340 LAMA2P24043 3122 aaKnown RBP22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 BACH1O14867 736 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 CAND2O75155 1236 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 HMGN5P82970 282 aaKnown RBP22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 GRIK4Q16099 956 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 LETM2Q2VYF4 491 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 ZNF618Q5T7W0 954 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 KRT40Q6A162 431 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 PPP4R3AQ6IN85 833 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 TRAF7Q6Q0C0 670 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 PIK3AP1Q6ZUJ8 805 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 NAP1L4Q99733 375 aaKnown RBP22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 PCDHA10Q9Y5I2 948 aa22.73■■□□□ 1.23
CACNA2D4-215ENST00000542340 TRIP12Q14669 1992 aaPredicted RBP22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 RRN3P2A6NIE6 340 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 GAS7O60861 476 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 GCFC2P16383 781 aaKnown RBP22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 THPOP40225 353 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 NR5A1Q13285 461 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 GPNMBQ14956 572 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 PLCB4Q15147 1175 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 SWSAP1Q6NVH7 229 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 OTOP2Q7RTS6 562 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 TNFRSF25Q93038 417 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 BACH2Q9BYV9 841 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 ZNF302Q9NR11 478 aa22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 DDX25Q9UHL0 483 aaKnown RBP22.72■■□□□ 1.23
CACNA2D4-215ENST00000542340 MBLAC1A4D2B0 266 aaPredicted RBP22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 PSAPP07602 524 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 ACTN1P12814 892 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 INSRRP14616 1297 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 EARS2Q5JPH6 523 aaKnown RBP22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 LRCH2Q5VUJ6 765 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 TAF2Q6P1X5 1199 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 CCDC60Q8IWA6 550 aaPredicted RBP22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 DIS3L2Q8IYB7 885 aaKnown RBP22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 TEKT3Q9BXF9 490 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 FTOQ9C0B1 505 aaKnown RBP eCLIP22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 CXXC1Q9P0U4 656 aaPredicted RBP22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 TRPC6Q9Y210 931 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 SZT2Q5T011 3432 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 TANC1Q9C0D5 1861 aa22.71■■□□□ 1.23
CACNA2D4-215ENST00000542340 POTEB3A0JP26 581 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 WDR64B1ANS9 1081 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 RSPH10B2B2RC85 870 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 BTBD18B2RXH4 712 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 PSMD10O75832 226 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 CXCL10P02778 98 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 RSPH10BP0C881 870 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 MCM2P49736 904 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 MARCH8Q5T0T0 291 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 PDXDC2PQ6P474 469 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 POTEBQ6S5H4 581 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 RPAINQ86UA6 219 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 ETNPPLQ8TBG4 499 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 TUBE1Q9UJT0 475 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 SAMM50Q9Y512 469 aa22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 MAFBQ9Y5Q3 323 aaPredicted RBP22.7■■□□□ 1.22
CACNA2D4-215ENST00000542340 SCN5AQ14524 2016 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 SLC37A4O43826 429 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 HBP1O60381 514 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 NBNO60934 754 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 SFNP31947 248 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 FOSBP53539 338 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 FAM109BQ6ICB4 259 aaPredicted RBP22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 ATP8B4Q8TF62 1192 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 C8orf76Q96K31 380 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 FAM20AQ96MK3 541 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 DISC1Q9NRI5 854 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 KAT6AQ92794 2004 aa22.69■■□□□ 1.22
CACNA2D4-215ENST00000542340 CCNT1O60563 726 aaKnown RBP22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 JAK3P52333 1124 aa22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 IGBP1P78318 339 aa22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 MBTPS1Q14703 1052 aa22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 SAFBQ15424 915 aaKnown RBP eCLIP22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 FAM184AQ8NB25 1140 aa22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 RDM1Q8NG50 284 aa22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 GJA10Q969M2 543 aa22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 UNC45AQ9H3U1 944 aa22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 SLC4A7Q9Y6M7 1214 aa22.68■■□□□ 1.22
CACNA2D4-215ENST00000542340 FAM205CA6NFA0 338 aa22.67■■□□□ 1.22
CACNA2D4-215ENST00000542340 ZBBXA8MT70 800 aa22.67■■□□□ 1.22
CACNA2D4-215ENST00000542340 TBX3O15119 743 aa22.67■■□□□ 1.22
CACNA2D4-215ENST00000542340 BAIAP3O94812 1187 aa22.67■■□□□ 1.22
CACNA2D4-215ENST00000542340 RPLP2P05387 115 aaKnown RBP22.67■■□□□ 1.22
CACNA2D4-215ENST00000542340 ATP4AP20648 1035 aa22.67■■□□□ 1.22
CACNA2D4-215ENST00000542340 FAM26DQ5JW98 314 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms