RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SFI1A8K8P3 1242 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 PRLRP16471 622 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
CNOT9-208ENST00000542068 COPB2P35606 906 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 ERVK-9P63128 1117 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 GPBP1Q86WP2 473 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 CAVIN3Q969G5 261 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 ITGA4P13612 1032 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 FLT3P36888 993 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 PLS1Q14651 629 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 SEPT2Q15019 361 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 ASTE1Q2TB18 679 aaPredicted RBP16.78■□□□□ 0.28
CNOT9-208ENST00000542068 GJB7Q6PEY0 223 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 NLRP14Q86W24 1093 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 UHMK1Q8TAS1 419 aaKnown RBP16.78■□□□□ 0.28
CNOT9-208ENST00000542068 CELF4Q9BZC1 486 aaKnown RBP16.78■□□□□ 0.28
CNOT9-208ENST00000542068 LUC7LQ9NQ29 371 aaKnown RBP16.78■□□□□ 0.28
CNOT9-208ENST00000542068 POTEFA5A3E0 1075 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 PPP1R37O75864 691 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 POTEIP0CG38 1075 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 LRRC63Q05C16 580 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 CDC42EP5Q6NZY7 148 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 POTEEQ6S8J3 1075 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 BCAS3Q9H6U6 928 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 AMACRQ9UHK6 382 aa16.78■□□□□ 0.28
CNOT9-208ENST00000542068 LRP5O75197 1615 aa16.77■□□□□ 0.28
CNOT9-208ENST00000542068 COL16A1Q07092 1604 aaPredicted RBP16.77■□□□□ 0.28
CNOT9-208ENST00000542068 PTK2Q05397 1052 aa16.77■□□□□ 0.28
CNOT9-208ENST00000542068 ACTN3Q08043 901 aaPredicted RBP16.77■□□□□ 0.28
CNOT9-208ENST00000542068 SF3B2Q13435 895 aaKnown RBP16.77■□□□□ 0.28
CNOT9-208ENST00000542068 NAB2Q15742 525 aa16.77■□□□□ 0.28
CNOT9-208ENST00000542068 ATP6V1G3Q96LB4 118 aa16.77■□□□□ 0.28
CNOT9-208ENST00000542068 QTRT2Q9H974 415 aaKnown RBP16.77■□□□□ 0.28
CNOT9-208ENST00000542068 GOPCQ9HD26 462 aa16.77■□□□□ 0.28
CNOT9-208ENST00000542068 GDF3Q9NR23 364 aa16.77■□□□□ 0.28
CNOT9-208ENST00000542068 SEPT11Q9NVA2 429 aaKnown RBP16.77■□□□□ 0.28
CNOT9-208ENST00000542068 CEP72Q9P209 647 aa16.77■□□□□ 0.28
CNOT9-208ENST00000542068 MEFVO15553 781 aaPredicted RBP16.77■□□□□ 0.27
CNOT9-208ENST00000542068 EEF2P13639 858 aaKnown RBP16.77■□□□□ 0.27
CNOT9-208ENST00000542068 PPP1R2P41236 205 aa16.77■□□□□ 0.27
CNOT9-208ENST00000542068 TNNC1P63316 161 aa16.77■□□□□ 0.27
CNOT9-208ENST00000542068 PTGISQ16647 500 aa16.77■□□□□ 0.27
CNOT9-208ENST00000542068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.77■□□□□ 0.271e-10■■■■■ 74.5
CNOT9-208ENST00000542068 DAPK3O43293 454 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 CERKLQ49MI3 558 aaPredicted RBP16.76■□□□□ 0.27
CNOT9-208ENST00000542068 ASPRV1Q53RT3 343 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 SLFN13Q68D06 897 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 MAEAQ7L5Y9 396 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 EPN3Q9H201 632 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 NEUROG2Q9H2A3 272 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 BCS1LQ9Y276 419 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 PNMA6FA0A0J9YX94 578 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 PVALEFA0A1B0GWK0 134 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 TLDC2A0PJX2 215 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 GCOM1H8Y6P7 765 aaPredicted RBP16.76■□□□□ 0.27
CNOT9-208ENST00000542068 MMP10P09238 476 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 MYZAPP0CAP1 466 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 HSD17B3P37058 310 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 MDH1P40925 334 aaKnown RBP16.76■□□□□ 0.27
CNOT9-208ENST00000542068 SETQ01105 290 aaPredicted RBP16.76■□□□□ 0.27
CNOT9-208ENST00000542068 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 KCNH2Q12809 1159 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 SLC18A3Q16572 532 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 QRICH1Q2TAL8 776 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 MYCBPAPQ8TBZ2 947 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 MTMR9Q96QG7 549 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 NOVA2Q9UNW9 492 aaKnown RBP16.76■□□□□ 0.27
CNOT9-208ENST00000542068 PLCH1Q4KWH8 1693 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 DCDC2CA8MYV0 355 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 KRIT1O00522 736 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 PJA2O43164 708 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 PPP1R11O60927 126 aaPredicted RBP16.76■□□□□ 0.27
CNOT9-208ENST00000542068 SKOR1P84550 965 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 CDC37Q16543 378 aaPredicted RBP16.76■□□□□ 0.27
CNOT9-208ENST00000542068 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 IKZF4Q9H2S9 585 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 STK17AQ9UEE5 414 aa16.76■□□□□ 0.27
CNOT9-208ENST00000542068 GOLGA6L7A0A1B0GV03 622 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 CLIC2O15247 247 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 ABCB4P21439 1286 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 NR2F2P24468 414 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 LLGL1Q15334 1064 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 TBC1D10BQ4KMP7 808 aaPredicted RBP16.75■□□□□ 0.27
CNOT9-208ENST00000542068 MEI1Q5TIA1 1274 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 RNF10Q8N5U6 811 aaKnown RBP16.75■□□□□ 0.27
CNOT9-208ENST00000542068 USP38Q8NB14 1042 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 CCDC114Q96M63 670 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 TDRD3Q9H7E2 651 aaKnown RBP16.75■□□□□ 0.27
CNOT9-208ENST00000542068 FBXL5Q9UKA1 691 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 SSU72P8A0A1W2PR75 194 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 LCA5LO95447 670 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 CFBP00751 764 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 IL1R1P14778 569 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 CEP57Q86XR8 500 aa16.75■□□□□ 0.27
CNOT9-208ENST00000542068 LRRC4CQ9HCJ2 640 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms